RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 STAG1Q8WVM7 1258 aa15.36■□□□□ 0.05
PPP1CB-201ENST00000296122 LMBRD1Q9NUN5 540 aa15.36■□□□□ 0.05
PPP1CB-201ENST00000296122 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
PPP1CB-201ENST00000296122 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
PPP1CB-201ENST00000296122 PRDM1O75626 825 aa15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 RXRAP19793 462 aa15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 CDC37L1Q7L3B6 337 aa15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 GPHNQ9NQX3 736 aaPredicted RBP15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 ZSWIM5Q9P217 1185 aa15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 CEBPZQ03701 1054 aaKnown RBP15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 DIXDC1Q155Q3 683 aa15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 NSUN7Q8NE18 718 aaKnown RBP15.35■□□□□ 0.05
PPP1CB-201ENST00000296122 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 DOK7Q18PE1 504 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 NEDD4P46934 1319 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 UBE2HP62256 183 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 SLC26A6Q9BXS9 759 aa15.34■□□□□ 0.05
PPP1CB-201ENST00000296122 BTDP43251 543 aa15.33■□□□□ 0.05
PPP1CB-201ENST00000296122 ZRSR1Q15695 479 aaKnown RBP15.33■□□□□ 0.05
PPP1CB-201ENST00000296122 APOA5Q6Q788 366 aa15.33■□□□□ 0.05
PPP1CB-201ENST00000296122 ALG1Q9BT22 464 aa15.33■□□□□ 0.05
PPP1CB-201ENST00000296122 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.05
PPP1CB-201ENST00000296122 LIFRP42702 1097 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 MRE11P49959 708 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 CYB5R4Q7L1T6 521 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 SUPT20HQ8NEM7 779 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 CHAMP1Q96JM3 812 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 LRP5O75197 1615 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 CCDC178Q5BJE1 867 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 C15orf52Q6ZUT6 534 aaKnown RBP15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 POLLQ9UGP5 575 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 MTMR7Q9Y216 660 aa15.33■□□□□ 0.04
PPP1CB-201ENST00000296122 ADGRA1Q86SQ6 560 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 MAPKAPK5Q8IW41 473 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 MYL10Q9BUA6 226 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 AGXT2Q9BYV1 514 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 DCP1AQ9NPI6 582 aaPredicted RBP15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 TTF2Q9UNY4 1162 aaKnown RBP15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 TSPY3P0CV98 308 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 TSPY8P0CW00 308 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 CALM1P0DP23 149 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 CALM2P0DP24 149 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 CALM3P0DP25 149 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 POLD1P28340 1107 aa15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
PPP1CB-201ENST00000296122 ANTXR2P58335 489 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 STK38Q15208 465 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 KAT14Q9H8E8 782 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 BRMS1Q9HCU9 246 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 BRPF3Q9ULD4 1205 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 TNKSO95271 1327 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 CYP2D7A0A087X1C5 515 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 FOXP2O15409 715 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 DEFB132Q7Z7B7 95 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 DDX60Q8IY21 1712 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 MTA3Q9BTC8 594 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 SAP30BPQ9UHR5 308 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 LETM1O95202 739 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 ADD1P35611 737 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 PICALMQ13492 652 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 LY75O60449 1722 aa15.31■□□□□ 0.04
PPP1CB-201ENST00000296122 MROH7-TTC4A0A0A0MT08 1334 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 FAM173BQ6P4H8 233 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 CTR9Q6PD62 1173 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 ZNF654Q8IZM8 581 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 FBXL16Q8N461 479 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 SMARCC2Q8TAQ2 1214 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 ZSCAN10Q96SZ4 725 aaPredicted RBP15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 SBF2Q86WG5 1849 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 KIF5BP33176 963 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 ME1P48163 572 aa15.3■□□□□ 0.04
PPP1CB-201ENST00000296122 HLA-DOAP06340 250 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 ST3GAL1Q11201 340 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 TTC6Q86TZ1 520 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 DBNDD1Q9H9R9 158 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 RBM27Q9P2N5 1060 aaKnown RBP15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 IL1R1P14778 569 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 CHRNA5P30532 468 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 PODNQ7Z5L7 613 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 SGMS1Q86VZ5 419 aa15.29■□□□□ 0.04
PPP1CB-201ENST00000296122 LY9Q9HBG7 655 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms