RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 SLC4A4Q9Y6R1 1079 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 AK9Q5TCS8 1911 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 PRKAB2O43741 272 aa27.11■■□□□ 1.93
LINC01116-201ENST00000295549 MFAP1P55081 439 aaKnown RBP27.11■■□□□ 1.93
LINC01116-201ENST00000295549 MAPKAPK5Q8IW41 473 aa27.11■■□□□ 1.93
LINC01116-201ENST00000295549 ZFPM1Q8IX07 1006 aa27.11■■□□□ 1.93
LINC01116-201ENST00000295549 TEPSINQ96N21 525 aa27.11■■□□□ 1.93
LINC01116-201ENST00000295549 OSBPL5Q9H0X9 879 aaPredicted RBP27.11■■□□□ 1.93
LINC01116-201ENST00000295549 RPAP1Q9BWH6 1393 aaPredicted RBP27.11■■□□□ 1.93
LINC01116-201ENST00000295549 CCDC129Q6ZRS4 1044 aa27.1■■□□□ 1.93
LINC01116-201ENST00000295549 SDR42E1Q8WUS8 393 aa27.1■■□□□ 1.93
LINC01116-201ENST00000295549 DCP1AQ9NPI6 582 aaPredicted RBP27.1■■□□□ 1.93
LINC01116-201ENST00000295549 RAD50Q92878 1312 aa27.09■■□□□ 1.93
LINC01116-201ENST00000295549 CDC45O75419 566 aa27.09■■□□□ 1.93
LINC01116-201ENST00000295549 GIMAP6Q6P9H5 292 aa27.09■■□□□ 1.93
LINC01116-201ENST00000295549 ZNF589Q86UQ0 364 aaPredicted RBP27.09■■□□□ 1.93
LINC01116-201ENST00000295549 POLR2AP24928 1970 aaKnown RBP27.09■■□□□ 1.93
LINC01116-201ENST00000295549 CCDC171Q6TFL3 1326 aa27.09■■□□□ 1.93
LINC01116-201ENST00000295549 COL2A1P02458 1487 aaPredicted RBP27.09■■□□□ 1.93
LINC01116-201ENST00000295549 GSG1L2A8MUP6 293 aa27.08■■□□□ 1.93
LINC01116-201ENST00000295549 PATL2C9JE40 543 aaKnown RBP27.08■■□□□ 1.93
LINC01116-201ENST00000295549 TRAF5O00463 557 aa27.08■■□□□ 1.93
LINC01116-201ENST00000295549 DLK2Q6UY11 383 aa27.08■■□□□ 1.93
LINC01116-201ENST00000295549 CDCA5Q96FF9 252 aa27.08■■□□□ 1.93
LINC01116-201ENST00000295549 DHX36Q9H2U1 1008 aaKnown RBP27.08■■□□□ 1.93
LINC01116-201ENST00000295549 ATRNL1Q5VV63 1379 aa27.08■■□□□ 1.93
LINC01116-201ENST00000295549 PASKQ96RG2 1323 aa27.08■■□□□ 1.93
LINC01116-201ENST00000295549 SUPT20HL1Q3ZLR7 823 aa27.07■■□□□ 1.92
LINC01116-201ENST00000295549 PRAMEF18Q5VWM3 479 aa27.07■■□□□ 1.92
LINC01116-201ENST00000295549 CASC1Q6TDU7 716 aa27.07■■□□□ 1.92
LINC01116-201ENST00000295549 SH3BP5LQ7L8J4 393 aa27.07■■□□□ 1.92
LINC01116-201ENST00000295549 DDRGK1Q96HY6 314 aa27.07■■□□□ 1.92
LINC01116-201ENST00000295549 IL25Q9H293 177 aa27.07■■□□□ 1.92
LINC01116-201ENST00000295549 DDTLA6NHG4 134 aaPredicted RBP27.06■■□□□ 1.92
LINC01116-201ENST00000295549 SGSM2O43147 1006 aa27.06■■□□□ 1.92
LINC01116-201ENST00000295549 NBPF12Q5TAG4 269 aaPredicted RBP27.06■■□□□ 1.92
LINC01116-201ENST00000295549 CDAN1Q8IWY9 1227 aa27.06■■□□□ 1.92
LINC01116-201ENST00000295549 ZSCAN29Q8IWY8 852 aaPredicted RBP27.05■■□□□ 1.92
LINC01116-201ENST00000295549 HOOK2Q96ED9 719 aa27.05■■□□□ 1.92
LINC01116-201ENST00000295549 NACAP1Q9BZK3 213 aa27.05■■□□□ 1.92
LINC01116-201ENST00000295549 PALD1Q9ULE6 856 aa27.05■■□□□ 1.92
LINC01116-201ENST00000295549 FOXP2O15409 715 aa27.04■■□□□ 1.92
LINC01116-201ENST00000295549 APPP05067 770 aa27.04■■□□□ 1.92
LINC01116-201ENST00000295549 HSPD1P10809 573 aaKnown RBP27.04■■□□□ 1.92
LINC01116-201ENST00000295549 FMR1Q06787 632 aaKnown RBP eCLIP27.04■■□□□ 1.92
LINC01116-201ENST00000295549 VPS53Q5VIR6 699 aa27.04■■□□□ 1.92
LINC01116-201ENST00000295549 IFNL3Q8IZI9 196 aa27.04■■□□□ 1.92
LINC01116-201ENST00000295549 CSRNP1Q96S65 589 aa27.04■■□□□ 1.92
LINC01116-201ENST00000295549 EPB41L4AQ9HCS5 686 aaPredicted RBP27.04■■□□□ 1.92
LINC01116-201ENST00000295549 MCM9Q9NXL9 1143 aa27.04■■□□□ 1.92
LINC01116-201ENST00000295549 NF2P35240 595 aa27.03■■□□□ 1.92
LINC01116-201ENST00000295549 ESYT1Q9BSJ8 1104 aa27.03■■□□□ 1.92
LINC01116-201ENST00000295549 PI4KBQ9UBF8 816 aa27.03■■□□□ 1.92
LINC01116-201ENST00000295549 SAP30BPQ9UHR5 308 aaKnown RBP27.03■■□□□ 1.92
LINC01116-201ENST00000295549 FOCADQ5VW36 1801 aa27.02■■□□□ 1.92
LINC01116-201ENST00000295549 ALX1Q15699 326 aa27.02■■□□□ 1.92
LINC01116-201ENST00000295549 CDK5RAP2Q96SN8 1893 aa27.01■■□□□ 1.92
LINC01116-201ENST00000295549 MAP3K10Q02779 954 aa27.01■■□□□ 1.91
LINC01116-201ENST00000295549 TTC6Q86TZ1 520 aa27.01■■□□□ 1.91
LINC01116-201ENST00000295549 USP17L12C9JPN9 530 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 USP17L21D6R901 530 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 CELF2O95319 508 aaKnown RBP27■■□□□ 1.91
LINC01116-201ENST00000295549 POLR3DP05423 398 aaPredicted RBP27■■□□□ 1.91
LINC01116-201ENST00000295549 HLA-DOAP06340 250 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 SBK1Q52WX2 424 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 CST9Q5W186 159 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 CTR9Q6PD62 1173 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 METTL16Q86W50 562 aaKnown RBP27■■□□□ 1.91
LINC01116-201ENST00000295549 DSCC1Q9BVC3 393 aa27■■□□□ 1.91
LINC01116-201ENST00000295549 ARPP21Q9UBL0 812 aaPredicted RBP27■■□□□ 1.91
LINC01116-201ENST00000295549 TBC1D12O60347 775 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 TDO2P48775 406 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 FOXP4Q8IVH2 680 aaPredicted RBP26.99■■□□□ 1.91
LINC01116-201ENST00000295549 AMOTL1Q8IY63 956 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 NAPBQ9H115 298 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 ZMYM6O95789 1325 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 SSC5DA1L4H1 1573 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 FGAP02671 866 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 PLCD1P51178 756 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 C12orf60Q5U649 245 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 DCAF15Q66K64 600 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 EHD4Q9H223 541 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 ZNF408Q9H9D4 720 aa26.99■■□□□ 1.91
LINC01116-201ENST00000295549 PPP1R12BO60237 982 aaPredicted RBP26.98■■□□□ 1.91
LINC01116-201ENST00000295549 FKBP1BP68106 108 aa26.98■■□□□ 1.91
LINC01116-201ENST00000295549 HERC5Q9UII4 1024 aaKnown RBP26.98■■□□□ 1.91
LINC01116-201ENST00000295549 TAOK2Q9UL54 1235 aa26.98■■□□□ 1.91
LINC01116-201ENST00000295549 MIGA2Q7L4E1 593 aa26.97■■□□□ 1.91
LINC01116-201ENST00000295549 MAP3K11Q16584 847 aa26.96■■□□□ 1.91
LINC01116-201ENST00000295549 KIAA1211Q6ZU35 1233 aa26.96■■□□□ 1.91
LINC01116-201ENST00000295549 GBA2Q9HCG7 927 aaPredicted RBP26.96■■□□□ 1.91
LINC01116-201ENST00000295549 SERPINB13Q9UIV8 391 aa26.96■■□□□ 1.91
LINC01116-201ENST00000295549 DDX60LQ5H9U9 1706 aaKnown RBP26.96■■□□□ 1.91
LINC01116-201ENST00000295549 USP2O75604 605 aaPredicted RBP26.95■■□□□ 1.9
LINC01116-201ENST00000295549 CYP2D6P10635 497 aa26.95■■□□□ 1.9
LINC01116-201ENST00000295549 SLC4A8Q2Y0W8 1093 aa26.95■■□□□ 1.9
LINC01116-201ENST00000295549 C2orf69Q8N8R5 385 aa26.95■■□□□ 1.9
LINC01116-201ENST00000295549 CYP2D7A0A087X1C5 515 aa26.94■■□□□ 1.9
LINC01116-201ENST00000295549 GABPAQ06546 454 aa26.94■■□□□ 1.9
LINC01116-201ENST00000295549 ARMC9Q7Z3E5 817 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms