RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
SYNGAP1-201ENST00000293748 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
SYNGAP1-201ENST00000293748 KLRG2A4D1S0 409 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-201ENST00000293748 FGFR1OPO95684 399 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-201ENST00000293748 RNF187Q5TA31 235 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-201ENST00000293748 IQCA1LA6NCM1 817 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 IVLP07476 585 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 GJB2P29033 226 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 IFFO1Q0D2I5 559 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 PSMD1Q99460 953 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 SEPT11Q9NVA2 429 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 CTR9Q6PD62 1173 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 PPP1R12BO60237 982 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 CCDC175P0C221 793 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 CACNA2D4Q7Z3S7 1137 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 CCDC91Q7Z6B0 441 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 ARFGAP3Q9NP61 516 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 LRP5O75197 1615 aa13.55□□□□□ -0.24
SYNGAP1-201ENST00000293748 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 GNG11P61952 73 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 TFIP11Q9UBB9 837 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 CSF1RP07333 972 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 CHRNDQ07001 517 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 CIAPIN1Q6FI81 312 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 NUP88Q99567 741 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 SRRTQ9BXP5 876 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZSCAN16Q9H4T2 348 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 GOLGA6L10A0A0M3HER8 536 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 H7C1D1 291 aa13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 PUM3Q15397 648 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-201ENST00000293748 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZC3H4Q9UPT8 1303 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 TMX3Q96JJ7 454 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 ANAPC15P60006 121 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 SPECC1Q5M775 1068 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 EHBP1Q8NDI1 1231 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 TSG101Q99816 390 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 CCDC94Q9BW85 323 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 UTYO14607 1347 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 NUCB1Q02818 461 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 TMEM132AQ24JP5 1023 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 SLF2Q8IX21 1173 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZGPATQ8N5A5 531 aaKnown RBP13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 CCDC12Q8WUD4 166 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 TMOD2Q9NZR1 351 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 ZNRF3Q9ULT6 936 aa13.52□□□□□ -0.24
SYNGAP1-201ENST00000293748 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 SKILP12757 684 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 RASSF7Q02833 373 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 ZNF594Q96JF6 807 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 COA1Q9GZY4 146 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 HMG20BQ9P0W2 317 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 CIAO1O76071 339 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 DHX37Q8IY37 1157 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 LTBP3Q9NS15 1303 aa13.52□□□□□ -0.25
SYNGAP1-201ENST00000293748 SLU7O95391 586 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 MNAT1P51948 309 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 MYO1BO43795 1136 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 KIF20AO95235 890 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 UQCRFS1P1P0C7P4 283 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 GPSM2P81274 684 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 FOXO4P98177 505 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 SPECC1LQ69YQ0 1117 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 PODNQ7Z5L7 613 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 LPIN2Q92539 896 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 PYM1Q9BRP8 204 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 CACNA1FO60840 1977 aa13.51□□□□□ -0.25
SYNGAP1-201ENST00000293748 RBM25P49756 843 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms