RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 CLIC6Q96NY7 704 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 TAF1P21675 1872 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 GUCY1A2P33402 732 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 IGHMBP2P38935 993 aaKnown RBP23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 DDB1Q16531 1140 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 GLIPR1L2Q4G1C9 344 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 MAP3K14Q99558 947 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 BCL2L12Q9HB09 334 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 BCORQ6W2J9 1755 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 TIAM2Q8IVF5 1701 aa23.09■■□□□ 1.29
SCUBE1-201ENST00000290460 NTSR2O95665 410 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 CHRNDQ07001 517 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 TRIM29Q14134 588 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 NBPF11Q86T75 865 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 WTIPA6NIX2 430 aaPredicted RBP23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 USP27XA6NNY8 438 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 SYKP43405 635 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 TPD52L1Q16890 204 aaPredicted RBP23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 CMTR1Q8N1G2 835 aaKnown RBP23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 CCDC82Q8N4S0 544 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
SCUBE1-201ENST00000290460 SKILP12757 684 aa23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 TNNT1P13805 278 aa23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 U2AF2P26368 475 aaKnown RBP eCLIP23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 SSRP1Q08945 709 aaKnown RBP23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 NLRP12P59046 1061 aa23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 ADGRA1Q86SQ6 560 aa23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 CNNM2Q9H8M5 875 aa23.07■■□□□ 1.28
SCUBE1-201ENST00000290460 MARCH10Q8NA82 808 aaPredicted RBP23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 KRT23Q9C075 422 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 SMIM22K7EJ46 135 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 PPP6R2O75170 966 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 CCZ1BP86790 482 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 CCZ1P86791 482 aaPredicted RBP23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 PARP10Q53GL7 1025 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 MTERF4Q7Z6M4 381 aaKnown RBP23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 RGS22Q8NE09 1264 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 BPIFA3Q9BQP9 254 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 XPO4Q9C0E2 1151 aaKnown RBP23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 HPSEQ9Y251 543 aa23.06■■□□□ 1.28
SCUBE1-201ENST00000290460 SMC2O95347 1197 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 FMNL1O95466 1100 aaPredicted RBP23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 SDR42E1Q8WUS8 393 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 STAG1Q8WVM7 1258 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 NACAP1Q9BZK3 213 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 IFNKQ9P0W0 207 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 KCNJ14Q9UNX9 436 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 BTBD18B2RXH4 712 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 RBM6P78332 1123 aaKnown RBP23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 PNOCQ13519 176 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 NCAPHQ15003 741 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 ABCF2Q9UG63 623 aa23.05■■□□□ 1.28
SCUBE1-201ENST00000290460 SPATA31A1Q5TZJ5 1347 aa23.04■■□□□ 1.28
SCUBE1-201ENST00000290460 PNPLA7Q6ZV29 1317 aa23.04■■□□□ 1.28
SCUBE1-201ENST00000290460 WTAPQ15007 396 aa23.04■■□□□ 1.28
SCUBE1-201ENST00000290460 JMYQ8N9B5 988 aa23.04■■□□□ 1.28
SCUBE1-201ENST00000290460 LAMB2P55268 1798 aa23.04■■□□□ 1.28
SCUBE1-201ENST00000290460 IFNAR1P17181 557 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 SPECC1Q5M775 1068 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 STK36Q9NRP7 1315 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 COL22A1Q8NFW1 1626 aaPredicted RBP23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 MYH2Q9UKX2 1941 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 BCL9LQ86UU0 1499 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 MYH6P13533 1939 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 NEMFO60524 1076 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 GNAT2P19087 354 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 CYP7A1P22680 504 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 GYG1P46976 350 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 RTN1Q16799 776 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 RESP18Q5W5W9 173 aa23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 BAZ2AQ9UIF9 1905 aaKnown RBP23.03■■□□□ 1.28
SCUBE1-201ENST00000290460 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 C3orf67Q6ZVT6 689 aa23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 NOSTRINQ8IVI9 506 aa23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 NUP133Q8WUM0 1156 aa23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 TIGD1Q96MW7 591 aa23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 MINDY4BA8MYZ0 360 aa23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 SART3Q15020 963 aaKnown RBP23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 ZNF592Q92610 1267 aa23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 TRMT1Q9NXH9 659 aaKnown RBP23.02■■□□□ 1.28
SCUBE1-201ENST00000290460 RREB1Q92766 1687 aa23.02■■□□□ 1.27
SCUBE1-201ENST00000290460 MMP1P03956 469 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 TOB1P50616 345 aaPredicted RBP23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 PPARAQ07869 468 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 LONRF3Q496Y0 759 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 DIS3L2Q8IYB7 885 aaKnown RBP23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 CTIFO43310 598 aaKnown RBP23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 KCNQ2O43526 872 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 ATP1A3P13637 1013 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 TMC6Q7Z403 805 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 METTL16Q86W50 562 aaKnown RBP23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 RAI14Q9P0K7 980 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 TUBE1Q9UJT0 475 aa23.01■■□□□ 1.27
SCUBE1-201ENST00000290460 ERICH2A1L162 156 aa23■■□□□ 1.27
SCUBE1-201ENST00000290460 GRIN1Q05586 938 aa23■■□□□ 1.27
SCUBE1-201ENST00000290460 TRIM22Q8IYM9 498 aa23■■□□□ 1.27
SCUBE1-201ENST00000290460 HSD3B7Q9H2F3 369 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms