RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ABCC6O95255 1503 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 IKBKBO14920 756 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ADAMTS2O95450 1211 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 FBXL16Q8N461 479 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ERO1AQ96HE7 468 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 HLFQ16534 295 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 DZIP1Q86YF9 867 aaKnown RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 MLKLQ8NB16 471 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 BPIFA3Q9BQP9 254 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 MAGEC2Q9UBF1 373 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 IQSEC3Q9UPP2 1182 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 SCARF1Q14162 830 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 KCNF1Q9H3M0 494 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 ZNF287Q9HBT7 754 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 KAT6BQ8WYB5 2073 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 NUTM2BA6NNL0 878 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 NUTM2EB1AL46 878 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 URI1O94763 535 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 NUTM2AQ8IVF1 878 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 CTAGE1Q96RT6 745 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 ZPR1O75312 459 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 CASQ1P31415 396 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 SYCP1Q15431 976 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 ZNF397Q8NF99 534 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 TMX4Q9H1E5 349 aaPredicted RBP11.49□□□□□ -0.57
HMGCR-201ENST00000287936 STK36Q9NRP7 1315 aa11.49□□□□□ -0.57
HMGCR-201ENST00000287936 ARID4AP29374 1257 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 PPARAQ07869 468 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 DPCR1Q3MIW9 517 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 FAM177A1Q8N128 213 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 MRC1P22897 1456 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 SOS2Q07890 1332 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 MARCH6O60337 910 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 CYP19A1P11511 503 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 IFNAR1P17181 557 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 USP5P45974 858 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 IQCB1Q15051 598 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 KRBA2Q6ZNG9 492 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 TBC1D10CQ8IV04 446 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 SMAP1Q8IYB5 467 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 ZNF654Q8IZM8 581 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 NYXQ9GZU5 481 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 EVCP57679 992 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 MTA3Q9BTC8 594 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMGCR-201ENST00000287936 CABP5Q9NP86 173 aa11.48□□□□□ -0.57
HMGCR-201ENST00000287936 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.571e-11■■■■■ 35.1
HMGCR-201ENST00000287936 POSTNQ15063 836 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 FOXP1Q9H334 677 aaPredicted RBP11.47□□□□□ -0.57
HMGCR-201ENST00000287936 KAT14Q9H8E8 782 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 SPAG1Q07617 926 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 PNOCQ13519 176 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 RMND1Q9NWS8 449 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
HMGCR-201ENST00000287936 FDPSP14324 419 aaKnown RBP11.47□□□□□ -0.57
HMGCR-201ENST00000287936 GNAQP50148 359 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 TMCO3Q6UWJ1 677 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 TRIML1Q8N9V2 468 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 FANCBQ8NB91 859 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 DHX58Q96C10 678 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 MKNK2Q9HBH9 465 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 DNAI1Q9UI46 699 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 CCDC194A0A1B0GVG4 234 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 PCP11498 1178 aaKnown RBP11.47□□□□□ -0.57
HMGCR-201ENST00000287936 CALML3P27482 149 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 SOGA3Q5TF21 947 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 ENGASEQ8NFI3 743 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 KCNJ14Q9UNX9 436 aa11.47□□□□□ -0.57
HMGCR-201ENST00000287936 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.57
HMGCR-201ENST00000287936 LDHCP07864 332 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 BCAMP50895 628 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 SGMS1Q86VZ5 419 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 TSC1Q92574 1164 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 RASGRF1Q13972 1273 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
HMGCR-201ENST00000287936 OGFRQ9NZT2 677 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
HMGCR-201ENST00000287936 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.58
HMGCR-201ENST00000287936 KIF5CO60282 957 aa11.46□□□□□ -0.58
HMGCR-201ENST00000287936 AFMP43652 599 aa11.46□□□□□ -0.58
HMGCR-201ENST00000287936 RCAN1P53805 252 aa11.46□□□□□ -0.58
HMGCR-201ENST00000287936 ANTXR2P58335 489 aa11.46□□□□□ -0.58
HMGCR-201ENST00000287936 CHRNDQ07001 517 aa11.46□□□□□ -0.58
HMGCR-201ENST00000287936 ARHGAP29Q52LW3 1261 aa11.46□□□□□ -0.58
HMGCR-201ENST00000287936 FERMT2Q96AC1 680 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms