RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 KRT23Q9C075 422 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 NCAPGQ9BPX3 1015 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 IGHDP01880 384 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 HARSP12081 509 aaKnown RBP12.4□□□□□ -0.42
CHFR-201ENST00000266880 KLHL14Q9P2G3 628 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 USTQ9Y2C2 406 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 ZNF652Q9Y2D9 606 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 TRPA1O75762 1119 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHFR-201ENST00000266880 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 POLE2P56282 527 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 IL1RL1Q01638 556 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 PIP4K2CQ8TBX8 421 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 SCHIP1Q9P0W5 487 aaPredicted RBP12.4□□□□□ -0.42
CHFR-201ENST00000266880 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
CHFR-201ENST00000266880 TRAF5O00463 557 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
CHFR-201ENST00000266880 KRT3P12035 628 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
CHFR-201ENST00000266880 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 SBNO2Q9Y2G9 1366 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 NUCB1Q02818 461 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.4□□□□□ -0.43
CHFR-201ENST00000266880 ICE2Q659A1 982 aa12.4□□□□□ -0.43
CHFR-201ENST00000266880 N4BP2L2Q92802 583 aaPredicted RBP12.4□□□□□ -0.43
CHFR-201ENST00000266880 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 MFSD4BQ5TF39 518 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 JARID2Q92833 1246 aaPredicted RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 SDCCAG3Q96C92 435 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 SCYL1Q96KG9 808 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 NOC4LQ9BVI4 516 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 NUTM2BA6NNL0 878 aaPredicted RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 CCT5P48643 541 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 SUFUQ9UMX1 484 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 PPP1R12AO14974 1030 aaPredicted RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 EEF1DP29692 281 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 TXNDC2Q86VQ3 553 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 KIFAP3Q92845 792 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 BIRC3Q13489 604 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 VPS16Q9H269 839 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 MAP3K2Q9Y2U5 619 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 JADE1Q6IE81 842 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 SYF2O95926 243 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 BEND3Q5T5X7 828 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 CAPS2Q9BXY5 557 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 KRT10P13645 584 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 LIN9Q5TKA1 542 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
CHFR-201ENST00000266880 ANKRD50Q9ULJ7 1429 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 STX10O60499 249 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
CHFR-201ENST00000266880 MYL5Q02045 173 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 CCDC125Q86Z20 511 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHFR-201ENST00000266880 FANCCQ00597 558 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 WDR44Q5JSH3 913 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 PPP1R42Q7Z4L9 355 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 E2F4Q16254 413 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 CHST3Q7LGC8 479 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 KRT12Q99456 494 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 PSPC1Q8WXF1 523 aaKnown RBP12.38□□□□□ -0.43
CHFR-201ENST00000266880 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 CASP2P42575 452 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 RNF34Q969K3 372 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 C6orf50Q9HD87 102 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 GPTP24298 496 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
CHFR-201ENST00000266880 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
CHFR-201ENST00000266880 hCG_2014768A0A024R1R8 64 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 TRIM14Q14142 442 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.38□□□□□ -0.43
CHFR-201ENST00000266880 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
CHFR-201ENST00000266880 CRNKL1Q9BZJ0 848 aaKnown RBP12.38□□□□□ -0.43
CHFR-201ENST00000266880 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 ESYT2A0FGR8 921 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 VWA3AA6NCI4 1184 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 DAPK3O43293 454 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 TPD52L2O43399 206 aaKnown RBP12.37□□□□□ -0.43
CHFR-201ENST00000266880 IFT88Q13099 833 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 MTX1Q13505 466 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
CHFR-201ENST00000266880 TAF12Q16514 161 aa12.37□□□□□ -0.43
CHFR-201ENST00000266880 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms