RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 PPP2R2CQ9Y2T4 447 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 GTF2A1P52655 376 aaPredicted RBP18.78■□□□□ 0.6
SCAP-201ENST00000265565 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 COPRSQ9NQ92 184 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 JAG2Q9Y219 1238 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 SYNRGQ9UMZ2 1314 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 TBC1D8BQ0IIM8 1120 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 MICALCLQ6ZW33 695 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 PPP1R13BQ96KQ4 1090 aa18.78■□□□□ 0.6
SCAP-201ENST00000265565 BTBD18B2RXH4 712 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 NCBP1Q09161 790 aaKnown RBP18.77■□□□□ 0.6
SCAP-201ENST00000265565 ZNF532Q9HCE3 1301 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 RESTQ13127 1097 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 IFT81Q8WYA0 676 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 DTHD1Q6ZMT9 781 aa18.77■□□□□ 0.6
SCAP-201ENST00000265565 TRMT1LQ7Z2T5 733 aaKnown RBP18.77■□□□□ 0.6
SCAP-201ENST00000265565 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.59
SCAP-201ENST00000265565 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.59
SCAP-201ENST00000265565 PPP1R12BO60237 982 aaPredicted RBP18.76■□□□□ 0.59
SCAP-201ENST00000265565 SEC31AO94979 1220 aaKnown RBP18.76■□□□□ 0.59
SCAP-201ENST00000265565 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 SPTLC3Q9NUV7 552 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 GNAT2P19087 354 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 ERCC3P19447 782 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 TUBB4BP68371 445 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 PIK3AP1Q6ZUJ8 805 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
SCAP-201ENST00000265565 TTF2Q9UNY4 1162 aaKnown RBP18.76■□□□□ 0.59
SCAP-201ENST00000265565 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 PPARDQ03181 441 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 SLFNL1Q499Z3 407 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 WWC2Q6AWC2 1192 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 PSMB7Q99436 277 aa18.76■□□□□ 0.59
SCAP-201ENST00000265565 TUBBP07437 444 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 TSPY3P0CV98 308 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 TSPY8P0CW00 308 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 ZSCAN26Q16670 478 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 GPR161Q8N6U8 529 aaKnown RBP18.75■□□□□ 0.59
SCAP-201ENST00000265565 BLZF1Q9H2G9 400 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 VPS54Q9P1Q0 977 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 NIP7Q9Y221 180 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCAP-201ENST00000265565 ATP7BP35670 1465 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
SCAP-201ENST00000265565 PSDA5PKW4 1024 aaPredicted RBP18.75■□□□□ 0.59
SCAP-201ENST00000265565 SSR1P43307 286 aaKnown RBP18.75■□□□□ 0.59
SCAP-201ENST00000265565 PUS3Q9BZE2 481 aaKnown RBP18.75■□□□□ 0.59
SCAP-201ENST00000265565 KIF1BO60333 1816 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 ADAMTS2O95450 1211 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 NAPAP54920 295 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 GJB4Q9NTQ9 266 aa18.75■□□□□ 0.59
SCAP-201ENST00000265565 CALML3P27482 149 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 CCDC144BQ3MJ40 725 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 FBXO38Q6PIJ6 1188 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 MCM9Q9NXL9 1143 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 PNPLA6Q8IY17 1366 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 A0A1W2PQ27 194 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 A0A1W2PQ64 194 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 A0A1W2PQD8 194 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 OPA1O60313 960 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 ATP1A3P13637 1013 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 ZPR1O75312 459 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 MAP2K1Q02750 393 aaPredicted RBP18.74■□□□□ 0.59
SCAP-201ENST00000265565 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
SCAP-201ENST00000265565 UTP14CQ5TAP6 766 aaKnown RBP18.74■□□□□ 0.59
SCAP-201ENST00000265565 FAM76AQ8TAV0 307 aa18.74■□□□□ 0.59
SCAP-201ENST00000265565 SEPT7Q16181 437 aaKnown RBP18.73■□□□□ 0.59
SCAP-201ENST00000265565 CYP26C1Q6V0L0 522 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 TMTC1Q8IUR5 882 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 RTL9Q8NET4 1388 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 TMEM2Q9UHN6 1383 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 CDK12Q9NYV4 1490 aaPredicted RBP18.73■□□□□ 0.59
SCAP-201ENST00000265565 MADDQ8WXG6 1647 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 EFCAB8A8MWE9 144 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 TTC31Q49AM3 519 aaPredicted RBP18.73■□□□□ 0.59
SCAP-201ENST00000265565 IL25Q9H293 177 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 CALM1P0DP23 149 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 CALM2P0DP24 149 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 CALM3P0DP25 149 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 IL2RBP14784 551 aa18.73■□□□□ 0.59
SCAP-201ENST00000265565 RNASE9P60153 205 aaKnown RBP18.73■□□□□ 0.59
SCAP-201ENST00000265565 CDC25BP30305 580 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 NOSTRINQ8IVI9 506 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 BAG3O95817 575 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 TTC38Q5R3I4 469 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 CARMIL3Q8ND23 1372 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 VAV2P52735 878 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
SCAP-201ENST00000265565 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
SCAP-201ENST00000265565 ACSBG1Q96GR2 724 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 AIFM3Q96NN9 605 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 PAK1Q13153 545 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 SLC39A14Q15043 492 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 AFAP1L1Q8TED9 768 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 EEF2KMTQ96G04 330 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms