RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ARPP21Q9UBL0 812 aaPredicted RBP26.9■■□□□ 1.9
UFD1-201ENST00000263202 MCM2P49736 904 aa26.89■■□□□ 1.9
UFD1-201ENST00000263202 AK2P54819 239 aa26.89■■□□□ 1.9
UFD1-201ENST00000263202 USP40Q9NVE5 1235 aa26.89■■□□□ 1.9
UFD1-201ENST00000263202 TACC3Q9Y6A5 838 aa26.89■■□□□ 1.9
UFD1-201ENST00000263202 CYP2D7A0A087X1C5 515 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 LMNB1P20700 586 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 RBM5P52756 815 aaKnown RBP eCLIP26.88■■□□□ 1.89
UFD1-201ENST00000263202 CDC42EP5Q6NZY7 148 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 MAPKAPK5Q8IW41 473 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 NCOA7Q8NI08 942 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 MCM9Q9NXL9 1143 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 AKNAD1Q5T1N1 836 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 DHX32Q7L7V1 743 aaKnown RBP26.88■■□□□ 1.89
UFD1-201ENST00000263202 STAG1Q8WVM7 1258 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 TCEANC2Q96MN5 208 aa26.88■■□□□ 1.89
UFD1-201ENST00000263202 ALDH8A1Q9H2A2 487 aaPredicted RBP26.88■■□□□ 1.89
UFD1-201ENST00000263202 FLT1P17948 1338 aa26.87■■□□□ 1.89
UFD1-201ENST00000263202 SMIM22K7EJ46 135 aa26.87■■□□□ 1.89
UFD1-201ENST00000263202 USP17L8P0C7I0 530 aa26.87■■□□□ 1.89
UFD1-201ENST00000263202 EIF6P56537 245 aaKnown RBP26.87■■□□□ 1.89
UFD1-201ENST00000263202 CFAP100Q494V2 611 aa26.87■■□□□ 1.89
UFD1-201ENST00000263202 HDAC9Q9UKV0 1011 aa26.87■■□□□ 1.89
UFD1-201ENST00000263202 NEDD4P46934 1319 aa26.86■■□□□ 1.89
UFD1-201ENST00000263202 EXOSC10Q01780 885 aaKnown RBP26.86■■□□□ 1.89
UFD1-201ENST00000263202 MB21D2Q8IYB1 491 aaPredicted RBP26.86■■□□□ 1.89
UFD1-201ENST00000263202 INCENPQ9NQS7 918 aa26.86■■□□□ 1.89
UFD1-201ENST00000263202 WDHD1O75717 1129 aaPredicted RBP26.86■■□□□ 1.89
UFD1-201ENST00000263202 CYP2D6P10635 497 aa26.86■■□□□ 1.89
UFD1-201ENST00000263202 TRDNQ13061 729 aa26.86■■□□□ 1.89
UFD1-201ENST00000263202 RALYLQ86SE5 291 aaKnown RBP26.86■■□□□ 1.89
UFD1-201ENST00000263202 OGFOD1Q8N543 542 aa26.86■■□□□ 1.89
UFD1-201ENST00000263202 EVX2Q03828 476 aa26.85■■□□□ 1.89
UFD1-201ENST00000263202 MFSD6Q6ZSS7 791 aa26.85■■□□□ 1.89
UFD1-201ENST00000263202 NOL8Q76FK4 1167 aaKnown RBP26.85■■□□□ 1.89
UFD1-201ENST00000263202 C12orf60Q5U649 245 aa26.84■■□□□ 1.89
UFD1-201ENST00000263202 NKX2-3Q8TAU0 364 aa26.84■■□□□ 1.89
UFD1-201ENST00000263202 RNF41Q9H4P4 317 aaPredicted RBP26.84■■□□□ 1.89
UFD1-201ENST00000263202 CNNM2Q9H8M5 875 aa26.84■■□□□ 1.89
UFD1-201ENST00000263202 RPS12P25398 132 aaKnown RBP26.83■■□□□ 1.89
UFD1-201ENST00000263202 TOB2Q14106 344 aaPredicted RBP26.83■■□□□ 1.89
UFD1-201ENST00000263202 STK11IPQ8N1F8 1099 aa26.83■■□□□ 1.89
UFD1-201ENST00000263202 DDX4Q9NQI0 724 aaKnown RBP26.83■■□□□ 1.89
UFD1-201ENST00000263202 SAP30BPQ9UHR5 308 aaKnown RBP26.83■■□□□ 1.89
UFD1-201ENST00000263202 ZNF541Q9H0D2 1346 aa26.83■■□□□ 1.89
UFD1-201ENST00000263202 PRMT6Q96LA8 375 aaPredicted RBP26.83■■□□□ 1.89
UFD1-201ENST00000263202 B4E1Z4 1266 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 MCM5P33992 734 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 PICALMQ13492 652 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 Q6ZUG5 572 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 CHST3Q7LGC8 479 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 TMX3Q96JJ7 454 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 KRT23Q9C075 422 aa26.82■■□□□ 1.88
UFD1-201ENST00000263202 FGRP09769 529 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 ANTXR2P58335 489 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 ANKRD1Q15327 319 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 SLC4A8Q2Y0W8 1093 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 AMOTL1Q8IY63 956 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 LARP6Q9BRS8 491 aaKnown RBP26.81■■□□□ 1.88
UFD1-201ENST00000263202 LRRC2Q9BYS8 371 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 LIMCH1Q9UPQ0 1083 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 ROBO3Q96MS0 1386 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 WDR19Q8NEZ3 1342 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 SPDYE2BA6NHP3 402 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 POLR3DP05423 398 aaPredicted RBP26.81■■□□□ 1.88
UFD1-201ENST00000263202 SPDYE6P0CI01 402 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 PCP11498 1178 aaKnown RBP26.81■■□□□ 1.88
UFD1-201ENST00000263202 DLGAP5Q15398 846 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 CYB5R4Q7L1T6 521 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 MTMR14Q8NCE2 650 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 TDRD3Q9H7E2 651 aaKnown RBP26.81■■□□□ 1.88
UFD1-201ENST00000263202 GJA3Q9Y6H8 435 aa26.81■■□□□ 1.88
UFD1-201ENST00000263202 PRC1O43663 620 aa26.8■■□□□ 1.88
UFD1-201ENST00000263202 NFIAQ12857 509 aa26.8■■□□□ 1.88
UFD1-201ENST00000263202 IDI2Q9BXS1 227 aa26.8■■□□□ 1.88
UFD1-201ENST00000263202 AGXT2Q9BYV1 514 aa26.8■■□□□ 1.88
UFD1-201ENST00000263202 SLC3A2P08195 630 aaKnown RBP26.79■■□□□ 1.88
UFD1-201ENST00000263202 GMPSP49915 693 aaPredicted RBP26.79■■□□□ 1.88
UFD1-201ENST00000263202 MMP14P50281 582 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 PLCD1P51178 756 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 DPF2Q92785 391 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.79■■□□□ 1.88
UFD1-201ENST00000263202 CACNB3P54284 484 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 RRP12Q5JTH9 1297 aaKnown RBP26.79■■□□□ 1.88
UFD1-201ENST00000263202 FBXL16Q8N461 479 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 SPRYD3Q8NCJ5 442 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 OSBPL5Q9H0X9 879 aaPredicted RBP26.79■■□□□ 1.88
UFD1-201ENST00000263202 TOMM22Q9NS69 142 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 ZSWIM5Q9P217 1185 aa26.79■■□□□ 1.88
UFD1-201ENST00000263202 SHTN1A0MZ66 631 aa26.78■■□□□ 1.88
UFD1-201ENST00000263202 KDM4AO75164 1064 aa26.78■■□□□ 1.88
UFD1-201ENST00000263202 ZNF280AP59817 542 aaPredicted RBP26.78■■□□□ 1.88
UFD1-201ENST00000263202 RNF181Q9P0P0 153 aa26.78■■□□□ 1.88
UFD1-201ENST00000263202 TPCN1Q9ULQ1 816 aa26.78■■□□□ 1.88
UFD1-201ENST00000263202 NPM3O75607 178 aaKnown RBP26.77■■□□□ 1.88
UFD1-201ENST00000263202 ZBED3Q96IU2 234 aaPredicted RBP26.77■■□□□ 1.88
UFD1-201ENST00000263202 FAM198AQ9UFP1 575 aa26.77■■□□□ 1.88
UFD1-201ENST00000263202 ORC4O43929 436 aa26.76■■□□□ 1.88
UFD1-201ENST00000263202 FGD1P98174 961 aa26.76■■□□□ 1.88
UFD1-201ENST00000263202 GPR162Q16538 588 aa26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms