RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 COL9A2Q14055 689 aaPredicted RBP7.16□□□□□ -1.26
CCDC54-201ENST00000261058 INPP5AQ14642 412 aa7.16□□□□□ -1.26
CCDC54-201ENST00000261058 REC114Q7Z4M0 266 aa7.16□□□□□ -1.26
CCDC54-201ENST00000261058 NACC1Q96RE7 527 aa7.16□□□□□ -1.26
CCDC54-201ENST00000261058 TACC3Q9Y6A5 838 aa7.16□□□□□ -1.26
CCDC54-201ENST00000261058 SNCAIPQ9Y6H5 919 aa7.16□□□□□ -1.26
CCDC54-201ENST00000261058 PRR36Q9H6K5 1346 aa7.15□□□□□ -1.26
CCDC54-201ENST00000261058 C9orf172C9J069 976 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 TMPRSS2O15393 492 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 CDK8P49336 464 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 ERVK-24P63145 666 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.27
CCDC54-201ENST00000261058 APOBRQ0VD83 1088 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 ADGRE1Q14246 886 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 LRFN4Q6PJG9 635 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 CYFIP1Q7L576 1253 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 JARID2Q92833 1246 aaPredicted RBP7.15□□□□□ -1.27
CCDC54-201ENST00000261058 SEC16BQ96JE7 1060 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 CRIM1Q9NZV1 1036 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 PPP1R9AQ9ULJ8 1098 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 PCDHA4Q9UN74 947 aa7.15□□□□□ -1.27
CCDC54-201ENST00000261058 FGRP09769 529 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 ADH5P11766 374 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 MBTPS1Q14703 1052 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 ANKRD34AQ69YU3 496 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 REXO1Q8N1G1 1221 aaKnown RBP7.14□□□□□ -1.27
CCDC54-201ENST00000261058 PLPPR2Q96GM1 343 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 ACSBG1Q96GR2 724 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 AKTIPQ9H8T0 292 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 CYP4F12Q9HCS2 524 aa7.14□□□□□ -1.27
CCDC54-201ENST00000261058 POLR3KQ9Y2Y1 108 aaPredicted RBP7.14□□□□□ -1.27
CCDC54-201ENST00000261058 ATE1O95260 518 aa7.13□□□□□ -1.27
CCDC54-201ENST00000261058 SLFN14P0C7P3 912 aa7.13□□□□□ -1.27
CCDC54-201ENST00000261058 NTF4P34130 210 aa7.13□□□□□ -1.27
CCDC54-201ENST00000261058 ID3Q02535 119 aa7.13□□□□□ -1.27
CCDC54-201ENST00000261058 CWF19L2Q2TBE0 894 aaKnown RBP7.13□□□□□ -1.27
CCDC54-201ENST00000261058 WIPI1Q5MNZ9 446 aaPredicted RBP7.13□□□□□ -1.27
CCDC54-201ENST00000261058 NUTM2GQ5VZR2 741 aa7.13□□□□□ -1.27
CCDC54-201ENST00000261058 AGGF1Q8N302 714 aaeCLIP7.13□□□□□ -1.27
CCDC54-201ENST00000261058 SREK1Q8WXA9 508 aaKnown RBP7.13□□□□□ -1.27
CCDC54-201ENST00000261058 NKD1Q969G9 470 aa7.13□□□□□ -1.27
CCDC54-201ENST00000261058 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 BPNT1O95861 308 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 NOS3P29474 1203 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 ARID5AQ03989 594 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
CCDC54-201ENST00000261058 HDXQ7Z353 690 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 EHMT1Q9H9B1 1298 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
CCDC54-201ENST00000261058 TLR3O15455 904 aaKnown RBP7.11□□□□□ -1.27
CCDC54-201ENST00000261058 ALX3O95076 343 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 SEZ6Q53EL9 994 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 DIEXFQ68CQ4 756 aaKnown RBP7.11□□□□□ -1.27
CCDC54-201ENST00000261058 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 DZIP1LQ8IYY4 767 aaKnown RBP7.11□□□□□ -1.27
CCDC54-201ENST00000261058 C2CD4AQ8NCU7 369 aaPredicted RBP7.11□□□□□ -1.27
CCDC54-201ENST00000261058 WFDC12Q8WWY7 111 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 FAM46AQ96IP4 442 aaKnown RBP7.11□□□□□ -1.27
CCDC54-201ENST00000261058 DCAF5Q96JK2 942 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 BRMS1Q9HCU9 246 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 DISC1Q9NRI5 854 aa7.11□□□□□ -1.27
CCDC54-201ENST00000261058 APBA3O96018 575 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 SF3A1Q15459 793 aaKnown RBP7.1□□□□□ -1.27
CCDC54-201ENST00000261058 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
CCDC54-201ENST00000261058 RAD18Q9NS91 495 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 USP21Q9UK80 565 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 EFR3BQ9Y2G0 817 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 HIF3AQ9Y2N7 669 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 DCDC2CA8MYV0 355 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 FANCGO15287 622 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 DRD2P14416 443 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 CHRNA4P43681 627 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 PREPP48147 710 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 ZNF165P49910 485 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 AKAP4Q5JQC9 854 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 ZBTB37Q5TC79 503 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 FDX2Q6P4F2 183 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 TXNRD3Q86VQ6 643 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 RNF214Q8ND24 703 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 ARMC5Q96C12 935 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 UBL7Q96S82 380 aaPredicted RBP7.1□□□□□ -1.27
CCDC54-201ENST00000261058 CEP41Q9BYV8 373 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 ATXN3LQ9H3M9 355 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 ZNRF3Q9ULT6 936 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 ACTL7BQ9Y614 415 aa7.1□□□□□ -1.27
CCDC54-201ENST00000261058 DNAJA1P31689 397 aaKnown RBP7.09□□□□□ -1.28
CCDC54-201ENST00000261058 IREB2P48200 963 aaKnown RBP7.09□□□□□ -1.28
CCDC54-201ENST00000261058 NASPP49321 788 aaPredicted RBP7.09□□□□□ -1.28
CCDC54-201ENST00000261058 TMEM201Q5SNT2 666 aa7.09□□□□□ -1.28
CCDC54-201ENST00000261058 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.09□□□□□ -1.28
CCDC54-201ENST00000261058 CD163Q86VB7 1156 aa7.09□□□□□ -1.28
CCDC54-201ENST00000261058 C12orf40Q86WS4 652 aa7.09□□□□□ -1.28
CCDC54-201ENST00000261058 C12orf50Q8NA57 414 aaPredicted RBP7.09□□□□□ -1.28
CCDC54-201ENST00000261058 RBBP8NLQ8NC74 664 aaPredicted RBP7.09□□□□□ -1.28
CCDC54-201ENST00000261058 ELMO3Q96BJ8 720 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms