RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TCHHQ07283 1943 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 PPFIA3O75145 1194 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 TMEM67Q5HYA8 995 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 CDC37L1Q7L3B6 337 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 LMBRD1Q9NUN5 540 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 LDHCP07864 332 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 LAMB1P07942 1786 aa26.27■■□□□ 1.8
SIX3-201ENST00000260653 EYA3Q99504 573 aa26.26■■□□□ 1.79
SIX3-201ENST00000260653 ZKSCAN3Q9BRR0 538 aa26.26■■□□□ 1.79
SIX3-201ENST00000260653 IFIT3O14879 490 aaKnown RBP26.26■■□□□ 1.79
SIX3-201ENST00000260653 BAG3O95817 575 aa26.26■■□□□ 1.79
SIX3-201ENST00000260653 PPP4CP60510 307 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 C7orf43Q8WVR3 580 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 NOL10Q9BSC4 688 aaKnown RBP26.25■■□□□ 1.79
SIX3-201ENST00000260653 PRPF40AO75400 957 aaKnown RBP26.25■■□□□ 1.79
SIX3-201ENST00000260653 CYP2D6P10635 497 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 BTDP43251 543 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 GSE1Q14687 1217 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 APOA5Q6Q788 366 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 SLC16A10Q8TF71 515 aa26.25■■□□□ 1.79
SIX3-201ENST00000260653 CERS5Q8N5B7 392 aa26.24■■□□□ 1.79
SIX3-201ENST00000260653 FAM184AQ8NB25 1140 aa26.24■■□□□ 1.79
SIX3-201ENST00000260653 ARPP21Q9UBL0 812 aaPredicted RBP26.24■■□□□ 1.79
SIX3-201ENST00000260653 MKRN1Q9UHC7 482 aaKnown RBP26.24■■□□□ 1.79
SIX3-201ENST00000260653 USP5P45974 858 aa26.24■■□□□ 1.79
SIX3-201ENST00000260653 GZF1Q9H116 711 aaPredicted RBP26.24■■□□□ 1.79
SIX3-201ENST00000260653 DBNDD1Q9H9R9 158 aa26.24■■□□□ 1.79
SIX3-201ENST00000260653 MCM9Q9NXL9 1143 aa26.24■■□□□ 1.79
SIX3-201ENST00000260653 G3V3G9 751 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 PRDM1O75626 825 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 RXRAP19793 462 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 HMGN5P82970 282 aaKnown RBP26.23■■□□□ 1.79
SIX3-201ENST00000260653 SLC4A8Q2Y0W8 1093 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 DCAF8Q5TAQ9 597 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 NFXL1Q6ZNB6 911 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 SGMS1Q86VZ5 419 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 MXD3Q9BW11 206 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 USP17L8P0C7I0 530 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 PDIA4P13667 645 aaKnown RBP26.23■■□□□ 1.79
SIX3-201ENST00000260653 LIFRP42702 1097 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 FERMT3Q86UX7 667 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 ESR2Q92731 530 aa26.23■■□□□ 1.79
SIX3-201ENST00000260653 GPR75-ASB3A0A0A6YYF3 556 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 SKOR2Q2VWA4 1001 aaPredicted RBP26.22■■□□□ 1.79
SIX3-201ENST00000260653 SBK1Q52WX2 424 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 CDK5RAP2Q96SN8 1893 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 MICU3Q86XE3 530 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 CCDC125Q86Z20 511 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 TGFBRAP1Q8WUH2 860 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 CHMP4CQ96CF2 233 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 GDPD2Q9HCC8 539 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 DLEC1Q9Y238 1755 aa26.22■■□□□ 1.79
SIX3-201ENST00000260653 SNED1Q8TER0 1413 aa26.21■■□□□ 1.79
SIX3-201ENST00000260653 FGRP09769 529 aa26.21■■□□□ 1.79
SIX3-201ENST00000260653 SART3Q15020 963 aaKnown RBP26.21■■□□□ 1.79
SIX3-201ENST00000260653 MYL10Q9BUA6 226 aa26.21■■□□□ 1.79
SIX3-201ENST00000260653 GAKO14976 1311 aa26.21■■□□□ 1.79
SIX3-201ENST00000260653 F8W031 263 aaPredicted RBP26.21■■□□□ 1.79
SIX3-201ENST00000260653 DHX16O60231 1041 aaKnown RBP26.21■■□□□ 1.79
SIX3-201ENST00000260653 METAP2P50579 478 aaKnown RBP eCLIP26.21■■□□□ 1.79
SIX3-201ENST00000260653 FAM163AQ96GL9 167 aaPredicted RBP26.21■■□□□ 1.79
SIX3-201ENST00000260653 ATP6V1DQ9Y5K8 247 aa26.21■■□□□ 1.79
SIX3-201ENST00000260653 NAV1Q8NEY1 1877 aa26.21■■□□□ 1.79
SIX3-201ENST00000260653 KCNQ5Q9NR82 932 aa26.2■■□□□ 1.79
SIX3-201ENST00000260653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.2■■□□□ 1.79
SIX3-201ENST00000260653 DDX49Q9Y6V7 483 aaKnown RBP26.2■■□□□ 1.79
SIX3-201ENST00000260653 RANBP6O60518 1105 aaKnown RBP26.2■■□□□ 1.78
SIX3-201ENST00000260653 FDPSP14324 419 aaKnown RBP26.2■■□□□ 1.78
SIX3-201ENST00000260653 FOSBP53539 338 aa26.2■■□□□ 1.78
SIX3-201ENST00000260653 SLF2Q8IX21 1173 aa26.2■■□□□ 1.78
SIX3-201ENST00000260653 UBAC1Q9BSL1 405 aa26.2■■□□□ 1.78
SIX3-201ENST00000260653 CNPY2Q9Y2B0 182 aa26.2■■□□□ 1.78
SIX3-201ENST00000260653 CCDC69A6NI79 296 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 CPLX1O14810 134 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 ZBTB43O43298 467 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 PCP11498 1178 aaKnown RBP26.19■■□□□ 1.78
SIX3-201ENST00000260653 WTAPQ15007 396 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 CCDC144CPQ8IYA2 1237 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 ERICH2A1L162 156 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 C21orf2O43822 256 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 PODNQ7Z5L7 613 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 MAPKAPK5Q8IW41 473 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 MTA3Q9BTC8 594 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 SUGT1Q9Y2Z0 365 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 DAGLAQ9Y4D2 1042 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 SLC12A7Q9Y666 1083 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 SCN9AQ15858 1988 aa26.19■■□□□ 1.78
SIX3-201ENST00000260653 ADD1P35611 737 aaKnown RBP26.18■■□□□ 1.78
SIX3-201ENST00000260653 CERS3Q8IU89 383 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 H3BQV1 296 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 CDC27P30260 824 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 DEKP35659 375 aaKnown RBP26.18■■□□□ 1.78
SIX3-201ENST00000260653 RHBDL3P58872 404 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 IFFO2Q5TF58 517 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 KIF3AQ9Y496 699 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 TNKSO95271 1327 aa26.18■■□□□ 1.78
SIX3-201ENST00000260653 ORC4O43929 436 aa26.17■■□□□ 1.78
SIX3-201ENST00000260653 DNM1Q05193 864 aaKnown RBP26.17■■□□□ 1.78
SIX3-201ENST00000260653 AOC3Q16853 763 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms