RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CYP4F22Q6NT55 531 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 RGMBQ6NW40 437 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 KBTBD3Q8NAB2 608 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 HOOK2Q96ED9 719 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 USP2O75604 605 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-201ENST00000260130 ADD2P35612 726 aa20.25■□□□□ 0.83
SDCBP-201ENST00000260130 ECE1P42892 770 aa20.25■□□□□ 0.83
SDCBP-201ENST00000260130 ZSCAN25Q6NSZ9 544 aa20.25■□□□□ 0.83
SDCBP-201ENST00000260130 CAPNS2Q96L46 248 aa20.25■□□□□ 0.83
SDCBP-201ENST00000260130 WDR33Q9C0J8 1336 aaKnown RBP20.25■□□□□ 0.83
SDCBP-201ENST00000260130 ZNF157P51786 506 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-201ENST00000260130 GRM1Q13255 1194 aa20.24■□□□□ 0.83
SDCBP-201ENST00000260130 UBE3CQ15386 1083 aa20.24■□□□□ 0.83
SDCBP-201ENST00000260130 LDLRAD1Q5T700 205 aa20.24■□□□□ 0.83
SDCBP-201ENST00000260130 ZSCAN29Q8IWY8 852 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-201ENST00000260130 RIOK1Q9BRS2 568 aaKnown RBP20.24■□□□□ 0.83
SDCBP-201ENST00000260130 PCNTO95613 3336 aa20.24■□□□□ 0.83
SDCBP-201ENST00000260130 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
SDCBP-201ENST00000260130 IREB2P48200 963 aaKnown RBP20.24■□□□□ 0.83
SDCBP-201ENST00000260130 TGFBRAP1Q8WUH2 860 aa20.24■□□□□ 0.83
SDCBP-201ENST00000260130 SLFNL1Q499Z3 407 aa20.23■□□□□ 0.83
SDCBP-201ENST00000260130 SH3BP5LQ7L8J4 393 aa20.23■□□□□ 0.83
SDCBP-201ENST00000260130 PLEKHM2Q8IWE5 1019 aa20.23■□□□□ 0.83
SDCBP-201ENST00000260130 PDE4AP27815 886 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 DCAF15Q66K64 600 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 CCDC102AQ96A19 550 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 CSRNP1Q96S65 589 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 OSBPL5Q9H0X9 879 aaPredicted RBP20.22■□□□□ 0.83
SDCBP-201ENST00000260130 DDTLA6NHG4 134 aaPredicted RBP20.22■□□□□ 0.83
SDCBP-201ENST00000260130 CHGBP05060 677 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 MIGA2Q7L4E1 593 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
SDCBP-201ENST00000260130 UNCXA6NJT0 531 aa20.21■□□□□ 0.83
SDCBP-201ENST00000260130 LRRFIP1Q32MZ4 808 aaKnown RBP20.21■□□□□ 0.83
SDCBP-201ENST00000260130 MAPKAPK5Q8IW41 473 aa20.21■□□□□ 0.83
SDCBP-201ENST00000260130 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
SDCBP-201ENST00000260130 BACH2Q9BYV9 841 aa20.21■□□□□ 0.83
SDCBP-201ENST00000260130 ANKRD13AQ8IZ07 590 aa20.21■□□□□ 0.83
SDCBP-201ENST00000260130 FLT1P17948 1338 aa20.21■□□□□ 0.83
SDCBP-201ENST00000260130 FAM155AB1AL88 458 aaPredicted RBP20.2■□□□□ 0.82
SDCBP-201ENST00000260130 ZFYP08048 801 aaPredicted RBP20.2■□□□□ 0.82
SDCBP-201ENST00000260130 DEKP35659 375 aaKnown RBP20.2■□□□□ 0.82
SDCBP-201ENST00000260130 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
SDCBP-201ENST00000260130 RNF113AO15541 343 aaKnown RBP20.19■□□□□ 0.82
SDCBP-201ENST00000260130 USP5P45974 858 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 NBR1Q14596 966 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 ZNF341Q9BYN7 854 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 SLC10A3P09131 477 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 MAP3K9P80192 1104 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.19■□□□□ 0.82
SDCBP-201ENST00000260130 SLC10A4Q96EP9 437 aa20.19■□□□□ 0.82
SDCBP-201ENST00000260130 CRNKL1Q9BZJ0 848 aaKnown RBP20.19■□□□□ 0.82
SDCBP-201ENST00000260130 DHX36Q9H2U1 1008 aaKnown RBP20.19■□□□□ 0.82
SDCBP-201ENST00000260130 AOC2O75106 756 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 MAP2K2P36507 400 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 NOGQ13253 232 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 RASAL3Q86YV0 1011 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 CLMNQ96JQ2 1002 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 PUS7LQ9H0K6 701 aaKnown RBP20.18■□□□□ 0.82
SDCBP-201ENST00000260130 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 COL2A1P02458 1487 aaPredicted RBP20.18■□□□□ 0.82
SDCBP-201ENST00000260130 MBD4O95243 580 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 MAP3K10Q02779 954 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.18■□□□□ 0.82
SDCBP-201ENST00000260130 WRNIP1Q96S55 665 aa20.18■□□□□ 0.82
SDCBP-201ENST00000260130 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-201ENST00000260130 APPBP2Q92624 585 aa20.17■□□□□ 0.82
SDCBP-201ENST00000260130 AIDAQ96BJ3 306 aa20.17■□□□□ 0.82
SDCBP-201ENST00000260130 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-201ENST00000260130 PI4KBQ9UBF8 816 aa20.17■□□□□ 0.82
SDCBP-201ENST00000260130 ZNF112Q9UJU3 913 aa20.17■□□□□ 0.82
SDCBP-201ENST00000260130 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
SDCBP-201ENST00000260130 CSADQ9Y600 493 aa20.17■□□□□ 0.82
SDCBP-201ENST00000260130 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
SDCBP-201ENST00000260130 TBC1D12O60347 775 aa20.16■□□□□ 0.82
SDCBP-201ENST00000260130 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
SDCBP-201ENST00000260130 SAP30BPQ9UHR5 308 aaKnown RBP20.16■□□□□ 0.82
SDCBP-201ENST00000260130 VGLL4Q14135 290 aa20.15■□□□□ 0.82
SDCBP-201ENST00000260130 SLURP2P0DP57 97 aa20.15■□□□□ 0.82
SDCBP-201ENST00000260130 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
SDCBP-201ENST00000260130 ZKSCAN4Q969J2 545 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-201ENST00000260130 ZIC5Q96T25 663 aa20.15■□□□□ 0.82
SDCBP-201ENST00000260130 AK9Q5TCS8 1911 aa20.14■□□□□ 0.82
SDCBP-201ENST00000260130 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 ELP3Q9H9T3 547 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 PHF20L1A8MW92 1017 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 PRKAB2O43741 272 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 INPP5BP32019 993 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 KIF23Q02241 960 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-201ENST00000260130 SPRYD7Q5W111 196 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 TICAM2Q86XR7 235 aa20.14■□□□□ 0.81
SDCBP-201ENST00000260130 FOXP4Q8IVH2 680 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-201ENST00000260130 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.14■□□□□ 0.81
SDCBP-201ENST00000260130 HERC5Q9UII4 1024 aaKnown RBP20.14■□□□□ 0.81
SDCBP-201ENST00000260130 HLA-DOAP06340 250 aa20.13■□□□□ 0.81
SDCBP-201ENST00000260130 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms