RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IL25Q9H293 177 aa16.93■□□□□ 0.3
VPS25-201ENST00000253794 ZMYM6O95789 1325 aa16.93■□□□□ 0.3
VPS25-201ENST00000253794 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 RASA3Q14644 834 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 TEPSINQ96N21 525 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 ESYT1Q9BSJ8 1104 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
VPS25-201ENST00000253794 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
VPS25-201ENST00000253794 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
VPS25-201ENST00000253794 PRKAB2O43741 272 aa16.91■□□□□ 0.3
VPS25-201ENST00000253794 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
VPS25-201ENST00000253794 ALX1Q15699 326 aa16.91■□□□□ 0.3
VPS25-201ENST00000253794 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
VPS25-201ENST00000253794 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
VPS25-201ENST00000253794 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
VPS25-201ENST00000253794 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
VPS25-201ENST00000253794 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
VPS25-201ENST00000253794 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
VPS25-201ENST00000253794 USP5P45974 858 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 FSTL1Q12841 308 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 SH3BP5LQ7L8J4 393 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 ZFPM1Q8IX07 1006 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 SDR42E1Q8WUS8 393 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
VPS25-201ENST00000253794 GLIS2Q9BZE0 524 aaPredicted RBP16.9■□□□□ 0.3
VPS25-201ENST00000253794 EPB41L4AQ9HCS5 686 aaPredicted RBP16.9■□□□□ 0.3
VPS25-201ENST00000253794 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
VPS25-201ENST00000253794 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 PICALMQ13492 652 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 METTL16Q86W50 562 aaKnown RBP16.89■□□□□ 0.29
VPS25-201ENST00000253794 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 PASKQ96RG2 1323 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
VPS25-201ENST00000253794 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
VPS25-201ENST00000253794 TCP10Q12799 353 aa16.88■□□□□ 0.29
VPS25-201ENST00000253794 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
VPS25-201ENST00000253794 DDRGK1Q96HY6 314 aa16.88■□□□□ 0.29
VPS25-201ENST00000253794 NACAP1Q9BZK3 213 aa16.88■□□□□ 0.29
VPS25-201ENST00000253794 EHD4Q9H223 541 aa16.88■□□□□ 0.29
VPS25-201ENST00000253794 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
VPS25-201ENST00000253794 DDTLA6NHG4 134 aaPredicted RBP16.87■□□□□ 0.29
VPS25-201ENST00000253794 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
VPS25-201ENST00000253794 TBC1D12O60347 775 aa16.87■□□□□ 0.29
VPS25-201ENST00000253794 HOOK2Q96ED9 719 aa16.87■□□□□ 0.29
VPS25-201ENST00000253794 CDCA5Q96FF9 252 aa16.87■□□□□ 0.29
VPS25-201ENST00000253794 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
VPS25-201ENST00000253794 SUPT20HL1Q3ZLR7 823 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 CSRNP1Q96S65 589 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 LSG1Q9H089 658 aaKnown RBP16.86■□□□□ 0.29
VPS25-201ENST00000253794 MCM9Q9NXL9 1143 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 PI4KBQ9UBF8 816 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
VPS25-201ENST00000253794 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
VPS25-201ENST00000253794 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 USP17L21D6R901 530 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 FGAP02671 866 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 GABPAQ06546 454 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 NBPF12Q5TAG4 269 aaPredicted RBP16.85■□□□□ 0.29
VPS25-201ENST00000253794 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
VPS25-201ENST00000253794 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 NAPBQ9H115 298 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 HERC5Q9UII4 1024 aaKnown RBP16.85■□□□□ 0.29
VPS25-201ENST00000253794 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 MYH1P12882 1939 aa16.85■□□□□ 0.29
VPS25-201ENST00000253794 TRAF5O00463 557 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
VPS25-201ENST00000253794 APPP05067 770 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 HLA-DOAP06340 250 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 TDO2P48775 406 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 FKBP1BP68106 108 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 PTH1RQ03431 593 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 DLK2Q6UY11 383 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 LAMB1P07942 1786 aa16.84■□□□□ 0.29
VPS25-201ENST00000253794 PLCD1P51178 756 aa16.83■□□□□ 0.28
VPS25-201ENST00000253794 DCAF15Q66K64 600 aa16.83■□□□□ 0.28
VPS25-201ENST00000253794 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.28
VPS25-201ENST00000253794 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
VPS25-201ENST00000253794 SAP30BPQ9UHR5 308 aaKnown RBP16.83■□□□□ 0.28
VPS25-201ENST00000253794 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
VPS25-201ENST00000253794 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
VPS25-201ENST00000253794 BAZ2AQ9UIF9 1905 aaKnown RBP16.82■□□□□ 0.28
VPS25-201ENST00000253794 PAPPA2Q9BXP8 1791 aa16.82■□□□□ 0.28
VPS25-201ENST00000253794 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms