RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 TCRBV5S4A2TA0A5A2 114 aa21.81■■□□□ 1.08
SNX4-201ENST00000251775 BIN1O00499 593 aa21.81■■□□□ 1.08
SNX4-201ENST00000251775 PUM3Q15397 648 aaKnown RBP21.81■■□□□ 1.08
SNX4-201ENST00000251775 SUSD4Q5VX71 490 aa21.81■■□□□ 1.08
SNX4-201ENST00000251775 CYB5R4Q7L1T6 521 aa21.81■■□□□ 1.08
SNX4-201ENST00000251775 LPIN2Q92539 896 aa21.81■■□□□ 1.08
SNX4-201ENST00000251775 ARGLU1Q9NWB6 273 aaPredicted RBP21.81■■□□□ 1.08
SNX4-201ENST00000251775 SNAP23O00161 211 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 TADA3O75528 432 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 APPP05067 770 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 UQCRFS1P1P0C7P4 283 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 NLRP12P59046 1061 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 FBXO18Q8NFZ0 1043 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 EIF5P55010 431 aaKnown RBP21.8■■□□□ 1.08
SNX4-201ENST00000251775 SLC20A2Q08357 652 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 CLIC4Q9Y696 253 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 MROH5Q6ZUA9 1318 aa21.8■■□□□ 1.08
SNX4-201ENST00000251775 VGLL3A8MV65 326 aa21.79■■□□□ 1.08
SNX4-201ENST00000251775 CPLX1O14810 134 aa21.79■■□□□ 1.08
SNX4-201ENST00000251775 POLR3DP05423 398 aaPredicted RBP21.79■■□□□ 1.08
SNX4-201ENST00000251775 INTS5Q6P9B9 1019 aaKnown RBP21.79■■□□□ 1.08
SNX4-201ENST00000251775 SLC3A2P08195 630 aaKnown RBP21.79■■□□□ 1.08
SNX4-201ENST00000251775 TPM4P67936 248 aa21.79■■□□□ 1.08
SNX4-201ENST00000251775 FANCCQ00597 558 aa21.79■■□□□ 1.08
SNX4-201ENST00000251775 TRDNQ13061 729 aa21.79■■□□□ 1.08
SNX4-201ENST00000251775 HSD3B7Q9H2F3 369 aa21.79■■□□□ 1.08
SNX4-201ENST00000251775 LMOD1P29536 600 aaPredicted RBP21.78■■□□□ 1.08
SNX4-201ENST00000251775 STK38Q15208 465 aa21.78■■□□□ 1.08
SNX4-201ENST00000251775 STRBPQ96SI9 672 aaKnown RBP21.78■■□□□ 1.08
SNX4-201ENST00000251775 CCP110O43303 1012 aa21.78■■□□□ 1.08
SNX4-201ENST00000251775 UBXN6Q9BZV1 441 aa21.78■■□□□ 1.08
SNX4-201ENST00000251775 SEC31BQ9NQW1 1179 aa21.78■■□□□ 1.08
SNX4-201ENST00000251775 ANGEL1Q9UNK9 670 aaKnown RBP21.78■■□□□ 1.08
SNX4-201ENST00000251775 DOCK2Q92608 1830 aa21.78■■□□□ 1.08
SNX4-201ENST00000251775 ROBO1Q9Y6N7 1651 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 KIF28PB7ZC32 967 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 SEC31AO94979 1220 aaKnown RBP21.77■■□□□ 1.08
SNX4-201ENST00000251775 ATP1A3P13637 1013 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 SF3A1Q15459 793 aaKnown RBP21.77■■□□□ 1.08
SNX4-201ENST00000251775 MNS1Q8NEH6 495 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 SRRTQ9BXP5 876 aaKnown RBP21.77■■□□□ 1.08
SNX4-201ENST00000251775 SENP2Q9HC62 589 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 B4E1Z4 1266 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 SH2B2O14492 632 aaPredicted RBP21.77■■□□□ 1.08
SNX4-201ENST00000251775 POLR3GO15318 223 aaPredicted RBP21.77■■□□□ 1.08
SNX4-201ENST00000251775 REXO1L1PQ8IX06 675 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 SPATA5Q8NB90 893 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 KCNG4Q8TDN1 519 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 CARD6Q9BX69 1037 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
SNX4-201ENST00000251775 URI1O94763 535 aaPredicted RBP21.76■■□□□ 1.07
SNX4-201ENST00000251775 ZNF202O95125 648 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 AK7Q96M32 723 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 TMX1Q9H3N1 280 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 INCENPQ9NQS7 918 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 COL22A1Q8NFW1 1626 aaPredicted RBP21.76■■□□□ 1.07
SNX4-201ENST00000251775 A0A0G2JS52 829 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 EFCAB8A8MWE9 144 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 RXRAP19793 462 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 RASGRF1Q13972 1273 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 MYSM1Q5VVJ2 828 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 CCDC87Q9NVE4 849 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 POLR3EQ9NVU0 708 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 CHD4Q14839 1912 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 PHLPP1O60346 1717 aa21.76■■□□□ 1.07
SNX4-201ENST00000251775 ZMYM6O95789 1325 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 IKBKBO14920 756 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 SPTLC2O15270 562 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 YEATS4O95619 227 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 SLC5A1P13866 664 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 CRKLP46109 303 aaKnown RBP21.75■■□□□ 1.07
SNX4-201ENST00000251775 TEX35Q5T0J7 233 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 DPF2Q92785 391 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 SASH3O75995 380 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 NEK11Q8NG66 645 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 AIFM3Q96NN9 605 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 TRERF1Q96PN7 1200 aa21.75■■□□□ 1.07
SNX4-201ENST00000251775 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
SNX4-201ENST00000251775 ATP8B1O43520 1251 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 KIF23Q02241 960 aaPredicted RBP21.74■■□□□ 1.07
SNX4-201ENST00000251775 BRAPQ7Z569 592 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 MAGEB6Q8N7X4 407 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 UTP14AQ9BVJ6 771 aaKnown RBP21.74■■□□□ 1.07
SNX4-201ENST00000251775 EPB41L4AQ9HCS5 686 aaPredicted RBP21.74■■□□□ 1.07
SNX4-201ENST00000251775 TBC1D8O95759 1140 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 CDC27P30260 824 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 ATP6V1AP38606 617 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 ISM2Q6H9L7 571 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 APOA5Q6Q788 366 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 MPHOSPH8Q99549 860 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 EPC1Q9H2F5 836 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 ECM29Q5VYK3 1845 aa21.74■■□□□ 1.07
SNX4-201ENST00000251775 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
SNX4-201ENST00000251775 ALX1Q15699 326 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 IGDCC4Q8TDY8 1250 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 CAMTA2O94983 1202 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 MBD4O95243 580 aa21.73■■□□□ 1.07
SNX4-201ENST00000251775 ST5P78524 1137 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms