RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 PPARAQ07869 468 aa22.78■■□□□ 1.24
SBDS-201ENST00000246868 DPY19L2Q6NUT2 758 aa22.78■■□□□ 1.24
SBDS-201ENST00000246868 CTR9Q6PD62 1173 aa22.78■■□□□ 1.24
SBDS-201ENST00000246868 PRMT6Q96LA8 375 aaPredicted RBP22.78■■□□□ 1.24
SBDS-201ENST00000246868 FOCADQ5VW36 1801 aa22.78■■□□□ 1.24
SBDS-201ENST00000246868 WDHD1O75717 1129 aaPredicted RBP22.77■■□□□ 1.24
SBDS-201ENST00000246868 SLC3A2P08195 630 aaKnown RBP22.77■■□□□ 1.24
SBDS-201ENST00000246868 CASTP20810 708 aaKnown RBP22.77■■□□□ 1.24
SBDS-201ENST00000246868 TRDNQ13061 729 aa22.77■■□□□ 1.24
SBDS-201ENST00000246868 PICALMQ13492 652 aa22.77■■□□□ 1.24
SBDS-201ENST00000246868 SBK1Q52WX2 424 aa22.77■■□□□ 1.24
SBDS-201ENST00000246868 MKRN1Q9UHC7 482 aaKnown RBP22.77■■□□□ 1.24
SBDS-201ENST00000246868 E7EWF7 191 aa22.76■■□□□ 1.23
SBDS-201ENST00000246868 ST18O60284 1047 aa22.76■■□□□ 1.23
SBDS-201ENST00000246868 POLR3DP05423 398 aaPredicted RBP22.76■■□□□ 1.23
SBDS-201ENST00000246868 HMGB1P09429 215 aaKnown RBP22.76■■□□□ 1.23
SBDS-201ENST00000246868 ADCK5Q3MIX3 580 aa22.76■■□□□ 1.23
SBDS-201ENST00000246868 RNF41Q9H4P4 317 aaPredicted RBP22.76■■□□□ 1.23
SBDS-201ENST00000246868 TDRD3Q9H7E2 651 aaKnown RBP22.76■■□□□ 1.23
SBDS-201ENST00000246868 ANAPC4Q9UJX5 808 aa22.76■■□□□ 1.23
SBDS-201ENST00000246868 CYP46A1Q9Y6A2 500 aa22.76■■□□□ 1.23
SBDS-201ENST00000246868 TAF6LQ9Y6J9 622 aa22.76■■□□□ 1.23
SBDS-201ENST00000246868 NEK4P51957 841 aa22.75■■□□□ 1.23
SBDS-201ENST00000246868 BLOC1S2Q6QNY1 142 aa22.75■■□□□ 1.23
SBDS-201ENST00000246868 NEK1Q96PY6 1258 aa22.75■■□□□ 1.23
SBDS-201ENST00000246868 IDI2Q9BXS1 227 aa22.75■■□□□ 1.23
SBDS-201ENST00000246868 MYH1P12882 1939 aa22.75■■□□□ 1.23
SBDS-201ENST00000246868 LMOD1P29536 600 aaPredicted RBP22.75■■□□□ 1.23
SBDS-201ENST00000246868 RALYLQ86SE5 291 aaKnown RBP22.75■■□□□ 1.23
SBDS-201ENST00000246868 UPF3BQ9BZI7 483 aaKnown RBP22.75■■□□□ 1.23
SBDS-201ENST00000246868 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
SBDS-201ENST00000246868 SAP30BPQ9UHR5 308 aaKnown RBP22.75■■□□□ 1.23
SBDS-201ENST00000246868 LAMB1P07942 1786 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
SBDS-201ENST00000246868 CTDSPL2Q05D32 466 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 AKNAD1Q5T1N1 836 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 MFSD6Q6ZSS7 791 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 TBC1D10CQ8IV04 446 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 NCOA7Q8NI08 942 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 CNNM2Q9H8M5 875 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 ZSWIM6Q9HCJ5 1215 aa22.74■■□□□ 1.23
SBDS-201ENST00000246868 SHTN1A0MZ66 631 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 DDNO94850 711 aaPredicted RBP22.73■■□□□ 1.23
SBDS-201ENST00000246868 PCP11498 1178 aaKnown RBP22.73■■□□□ 1.23
SBDS-201ENST00000246868 SPDYE2Q495Y8 402 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 RBM26Q5T8P6 1007 aaKnown RBP22.73■■□□□ 1.23
SBDS-201ENST00000246868 C12orf60Q5U649 245 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 STOX1Q6ZVD7 989 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 RUFY3Q7L099 469 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 STAG1Q8WVM7 1258 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 ZBED3Q96IU2 234 aaPredicted RBP22.73■■□□□ 1.23
SBDS-201ENST00000246868 NBPF3Q9H094 633 aa22.73■■□□□ 1.23
SBDS-201ENST00000246868 ZNF70Q9UC06 446 aaPredicted RBP22.73■■□□□ 1.23
SBDS-201ENST00000246868 CYP2D7A0A087X1C5 515 aa22.72■■□□□ 1.23
SBDS-201ENST00000246868 WNT10BO00744 389 aa22.72■■□□□ 1.23
SBDS-201ENST00000246868 NFIAQ12857 509 aa22.72■■□□□ 1.23
SBDS-201ENST00000246868 TTC6Q86TZ1 520 aa22.72■■□□□ 1.23
SBDS-201ENST00000246868 KRT23Q9C075 422 aa22.72■■□□□ 1.23
SBDS-201ENST00000246868 OSBPL5Q9H0X9 879 aaPredicted RBP22.72■■□□□ 1.23
SBDS-201ENST00000246868 DDX4Q9NQI0 724 aaKnown RBP22.72■■□□□ 1.23
SBDS-201ENST00000246868 CACNB3P54284 484 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 BECN1Q14457 450 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 KIF4BQ2VIQ3 1234 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 TOMM22Q9NS69 142 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 DDX60LQ5H9U9 1706 aaKnown RBP22.71■■□□□ 1.23
SBDS-201ENST00000246868 CLRN2A0PK11 232 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 ENTPD3O75355 529 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 CYP2D6P10635 497 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 PDE4BQ07343 736 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 TBC1D10BQ4KMP7 808 aaPredicted RBP22.71■■□□□ 1.23
SBDS-201ENST00000246868 FKBP1CQ5VVH2 108 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 SAMD7Q7Z3H4 446 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 DHX36Q9H2U1 1008 aaKnown RBP22.71■■□□□ 1.23
SBDS-201ENST00000246868 VEZTQ9HBM0 779 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 ZNF287Q9HBT7 754 aa22.71■■□□□ 1.23
SBDS-201ENST00000246868 HLA-DOAP06340 250 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 RPS6KB1P23443 525 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 TCP10Q12799 353 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 SLC4A8Q2Y0W8 1093 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 NBPF9Q3BBW0 867 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 HSCBQ8IWL3 235 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 PDRG1Q9NUG6 133 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 FAM198AQ9UFP1 575 aa22.7■■□□□ 1.22
SBDS-201ENST00000246868 ROBO3Q96MS0 1386 aa22.69■■□□□ 1.22
SBDS-201ENST00000246868 DHX32Q7L7V1 743 aaKnown RBP22.69■■□□□ 1.22
SBDS-201ENST00000246868 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
SBDS-201ENST00000246868 STK11IPQ8N1F8 1099 aa22.69■■□□□ 1.22
SBDS-201ENST00000246868 SNX21Q969T3 373 aa22.69■■□□□ 1.22
SBDS-201ENST00000246868 CPA1P15085 419 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 MCM5P33992 734 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 MCM2P49736 904 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 GLTPD2A6NH11 291 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 TCP10L2B9ZVM9 353 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 EPS15P42566 896 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 TNNI2P48788 182 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 PLCD1P51178 756 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 FGD1P98174 961 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 TNFAIP1Q13829 316 aa22.68■■□□□ 1.22
SBDS-201ENST00000246868 RRP12Q5JTH9 1297 aaKnown RBP22.68■■□□□ 1.22
SBDS-201ENST00000246868 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms