RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 UBN2Q6ZU65 1347 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
PTK7-201ENST00000230418 NDUFA8P51970 172 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 EIF5P55010 431 aaKnown RBP16.57■□□□□ 0.24
PTK7-201ENST00000230418 TFAP4Q01664 338 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 RESTQ13127 1097 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
PTK7-201ENST00000230418 NOC3LQ8WTT2 800 aaKnown RBP16.57■□□□□ 0.24
PTK7-201ENST00000230418 KNDC1Q76NI1 1749 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
PTK7-201ENST00000230418 SLC4A9Q96Q91 983 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 POLR2DO15514 142 aaKnown RBP16.56■□□□□ 0.24
PTK7-201ENST00000230418 MNS1Q8NEH6 495 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 MED23Q9ULK4 1368 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 SKILP12757 684 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 PPFIBP1Q86W92 1011 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 PRDX5P30044 214 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 LRMPQ12912 555 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 PIK3AP1Q6ZUJ8 805 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 PGBD1Q96JS3 809 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 NEDD4P46934 1319 aa16.56■□□□□ 0.24
PTK7-201ENST00000230418 UBASH3AP57075 661 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 KRI1Q8N9T8 703 aaKnown RBP16.55■□□□□ 0.24
PTK7-201ENST00000230418 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 PPP1R9BQ96SB3 815 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 KRT18P05783 430 aaKnown RBP16.55■□□□□ 0.24
PTK7-201ENST00000230418 UBA7P41226 1012 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 NR5A1Q13285 461 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 DACH1Q9UI36 760 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 CLEC17AQ6ZS10 378 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 MAPK8IP1Q9UQF2 711 aa16.55■□□□□ 0.24
PTK7-201ENST00000230418 DEXIO95424 95 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 CSF1RP07333 972 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 GTF2IP78347 998 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 COL15A1P39059 1388 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 KRT2P35908 639 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 ZNF827Q17R98 1081 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 TSC1Q92574 1164 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 CTDP1Q9Y5B0 961 aaPredicted RBP16.54■□□□□ 0.24
PTK7-201ENST00000230418 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
PTK7-201ENST00000230418 PFKFB1P16118 471 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 PNOCQ13519 176 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 NFAT5O94916 1531 aa16.54■□□□□ 0.24
PTK7-201ENST00000230418 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
PTK7-201ENST00000230418 NAPAP54920 295 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 GSTO1P78417 241 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 NRBP1Q9UHY1 535 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 CBFA2T2O43439 604 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 IDEP14735 1019 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 DOK7Q18PE1 504 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 MFSD14BQ5SR56 506 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 QTRT2Q9H974 415 aaKnown RBP16.53■□□□□ 0.24
PTK7-201ENST00000230418 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
PTK7-201ENST00000230418 CYP2D6P10635 497 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 TCP10Q12799 353 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 ZNF34Q8IZ26 560 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
PTK7-201ENST00000230418 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.242e-9■■■□□ 15.7
PTK7-201ENST00000230418 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
PTK7-201ENST00000230418 SPATA31A1Q5TZJ5 1347 aa16.53■□□□□ 0.24
PTK7-201ENST00000230418 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
PTK7-201ENST00000230418 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
PTK7-201ENST00000230418 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
PTK7-201ENST00000230418 TRMT44Q8IYL2 757 aaKnown RBP16.52■□□□□ 0.24
PTK7-201ENST00000230418 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
PTK7-201ENST00000230418 SCNN1DP51172 638 aa16.52■□□□□ 0.23
PTK7-201ENST00000230418 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.23
PTK7-201ENST00000230418 CDC27P30260 824 aa16.52■□□□□ 0.23
PTK7-201ENST00000230418 ADALQ6DHV7 355 aa16.52■□□□□ 0.23
PTK7-201ENST00000230418 C11orf57Q6ZUT1 292 aaPredicted RBP16.52■□□□□ 0.23
PTK7-201ENST00000230418 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.23
PTK7-201ENST00000230418 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.23
PTK7-201ENST00000230418 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.23
PTK7-201ENST00000230418 GPKOWQ92917 476 aaPredicted RBP eCLIP16.51■□□□□ 0.23
PTK7-201ENST00000230418 ZSCAN10Q96SZ4 725 aaPredicted RBP16.51■□□□□ 0.23
PTK7-201ENST00000230418 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 NMT2O60551 498 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
PTK7-201ENST00000230418 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
PTK7-201ENST00000230418 TANGO6Q9C0B7 1094 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 CAMTA1Q9Y6Y1 1673 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 OFD1O75665 1012 aa16.51■□□□□ 0.23
PTK7-201ENST00000230418 NAP1L1P55209 391 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms