RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 USP17L12C9JPN9 530 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 USP17L21D6R901 530 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 HSPA4P34932 840 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 NECTIN1Q15223 517 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
CTSC-201ENST00000227266 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 TBC1D32Q96NH3 1257 aa13.24□□□□□ -0.29
CTSC-201ENST00000227266 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
CTSC-201ENST00000227266 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 SLC27A2O14975 620 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 CTR9Q6PD62 1173 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 IDI2Q9BXS1 227 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
CTSC-201ENST00000227266 PALD1Q9ULE6 856 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 ZNF213O14771 459 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
CTSC-201ENST00000227266 CYP21A2P08686 494 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 CYP2D6P10635 497 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
CTSC-201ENST00000227266 HIRAP54198 1017 aaPredicted RBP13.23□□□□□ -0.29
CTSC-201ENST00000227266 ZFPM1Q8IX07 1006 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 RASEFQ8IZ41 740 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 SCAF8Q9UPN6 1271 aaKnown RBP13.23□□□□□ -0.29
CTSC-201ENST00000227266 TAF6LQ9Y6J9 622 aa13.23□□□□□ -0.29
CTSC-201ENST00000227266 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
CTSC-201ENST00000227266 EPHX2P34913 555 aa13.22□□□□□ -0.29
CTSC-201ENST00000227266 ZSCAN29Q8IWY8 852 aaPredicted RBP13.22□□□□□ -0.29
CTSC-201ENST00000227266 AMOTL1Q8IY63 956 aa13.22□□□□□ -0.29
CTSC-201ENST00000227266 ZNF526Q8TF50 670 aaPredicted RBP13.22□□□□□ -0.29
CTSC-201ENST00000227266 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
CTSC-201ENST00000227266 ARPP21Q9UBL0 812 aaPredicted RBP13.22□□□□□ -0.29
CTSC-201ENST00000227266 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
CTSC-201ENST00000227266 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
CTSC-201ENST00000227266 EVX2Q03828 476 aa13.21□□□□□ -0.29
CTSC-201ENST00000227266 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.29
CTSC-201ENST00000227266 PPARAQ07869 468 aa13.21□□□□□ -0.29
CTSC-201ENST00000227266 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.29
CTSC-201ENST00000227266 GGA3Q9NZ52 723 aa13.21□□□□□ -0.29
CTSC-201ENST00000227266 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.29
CTSC-201ENST00000227266 POTECB2RU33 542 aa13.21□□□□□ -0.3
CTSC-201ENST00000227266 EAPPQ56P03 285 aaPredicted RBP13.21□□□□□ -0.3
CTSC-201ENST00000227266 TAF1DQ9H5J8 278 aaPredicted RBP13.21□□□□□ -0.3
CTSC-201ENST00000227266 ENTPD3O75355 529 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
CTSC-201ENST00000227266 PLCD1P51178 756 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 SBK1Q52WX2 424 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 RRAGCQ9HB90 399 aa13.2□□□□□ -0.3
CTSC-201ENST00000227266 TNNI2P48788 182 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
CTSC-201ENST00000227266 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 FAM151AQ8WW52 585 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 KCNB2Q92953 911 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 TMEM39BQ9GZU3 492 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 CNTNAP1P78357 1384 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 DDTLA6NHG4 134 aaPredicted RBP13.19□□□□□ -0.3
CTSC-201ENST00000227266 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 ANAPC15P60006 121 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 RASA3Q14644 834 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 DYNLL2Q96FJ2 89 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
CTSC-201ENST00000227266 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
CTSC-201ENST00000227266 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 TOMM22Q9NS69 142 aa13.19□□□□□ -0.3
CTSC-201ENST00000227266 E7EWF7 191 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
CTSC-201ENST00000227266 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
CTSC-201ENST00000227266 KRT32Q14532 448 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 STOX1Q6ZVD7 989 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
CTSC-201ENST00000227266 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
CTSC-201ENST00000227266 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
CTSC-201ENST00000227266 CSRNP1Q96S65 589 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 ANAPC4Q9UJX5 808 aa13.18□□□□□ -0.3
CTSC-201ENST00000227266 PRDM1O75626 825 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
CTSC-201ENST00000227266 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 KIF2CQ99661 725 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 NEDD4P46934 1319 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms