RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 AP5S1Q9NUS5 200 aa10.65□□□□□ -0.7
PHGDH-213ENST00000641272 MED9Q9NWA0 146 aa10.65□□□□□ -0.7
PHGDH-213ENST00000641272 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
PHGDH-213ENST00000641272 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
PHGDH-213ENST00000641272 NTF3P20783 257 aa10.64□□□□□ -0.71
PHGDH-213ENST00000641272 WDR73Q6P4I2 378 aa10.64□□□□□ -0.71
PHGDH-213ENST00000641272 PGLYRP4Q96LB8 373 aa10.64□□□□□ -0.71
PHGDH-213ENST00000641272 NIT2Q9NQR4 276 aa10.64□□□□□ -0.71
PHGDH-213ENST00000641272 A0A1B0GUV1 79 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 GAGE12HA6NDE8 117 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 F2Z2F3 143 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 BCL2P10415 239 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 CTRLP40313 264 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 CIRBPQ14011 172 aaKnown RBP10.63□□□□□ -0.71
PHGDH-213ENST00000641272 HIGD2BQ4VC39 106 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 C15orf56Q8N910 161 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 SMIM12Q96EX1 92 aa10.63□□□□□ -0.71
PHGDH-213ENST00000641272 A0A087WYN8 130 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-213ENST00000641272 TEX46H3BTG2 121 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 PDE6DO43924 150 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 TWIST1Q15672 202 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 NUDT10Q8NFP7 164 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
PHGDH-213ENST00000641272 DPH3Q96FX2 82 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 NUDT11Q96G61 164 aa10.62□□□□□ -0.71
PHGDH-213ENST00000641272 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
PHGDH-213ENST00000641272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-213ENST00000641272 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-213ENST00000641272 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
PHGDH-213ENST00000641272 Q6ZNX1 250 aa10.61□□□□□ -0.71
PHGDH-213ENST00000641272 GATD1Q8NB37 220 aa10.61□□□□□ -0.71
PHGDH-213ENST00000641272 K7EN84 100 aa10.6□□□□□ -0.71
PHGDH-213ENST00000641272 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
PHGDH-213ENST00000641272 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
PHGDH-213ENST00000641272 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
PHGDH-213ENST00000641272 EIF5AL1Q6IS14 154 aaKnown RBP10.59□□□□□ -0.71
PHGDH-213ENST00000641272 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
PHGDH-213ENST00000641272 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
PHGDH-213ENST00000641272 PHOX2AO14813 284 aa10.58□□□□□ -0.72
PHGDH-213ENST00000641272 FOXA3P55318 350 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-213ENST00000641272 COX6A2Q02221 97 aa10.58□□□□□ -0.72
PHGDH-213ENST00000641272 RNASEKQ6P5S7 137 aaKnown RBP10.58□□□□□ -0.72
PHGDH-213ENST00000641272 APCSP02743 223 aa10.57□□□□□ -0.72
PHGDH-213ENST00000641272 CHCHD10Q8WYQ3 142 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-213ENST00000641272 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
PHGDH-213ENST00000641272 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
PHGDH-213ENST00000641272 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
PHGDH-213ENST00000641272 RNF185Q96GF1 192 aa10.56□□□□□ -0.72
PHGDH-213ENST00000641272 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
PHGDH-213ENST00000641272 Q6ZRU5 148 aa10.55□□□□□ -0.72
PHGDH-213ENST00000641272 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
PHGDH-213ENST00000641272 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
PHGDH-213ENST00000641272 FGF6P10767 208 aa10.54□□□□□ -0.72
PHGDH-213ENST00000641272 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
PHGDH-213ENST00000641272 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
PHGDH-213ENST00000641272 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
PHGDH-213ENST00000641272 C7orf33Q8WU49 177 aa10.54□□□□□ -0.72
PHGDH-213ENST00000641272 SMIM15Q7Z3B0 74 aa10.53□□□□□ -0.72
PHGDH-213ENST00000641272 SLC51BQ86UW2 128 aa10.53□□□□□ -0.72
PHGDH-213ENST00000641272 LYPD6BQ8NI32 183 aa10.53□□□□□ -0.72
PHGDH-213ENST00000641272 A0A096LNI7 61 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-213ENST00000641272 GATCO43716 136 aaKnown RBP10.52□□□□□ -0.73
PHGDH-213ENST00000641272 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.73
PHGDH-213ENST00000641272 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 NCR2O95944 276 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 XCL1P47992 114 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 CEBPGP53567 150 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 STPG4Q8N801 248 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 LINC00526Q96FQ7 95 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 TMEM242Q9NWH2 141 aa10.52□□□□□ -0.73
PHGDH-213ENST00000641272 TNXBP22105 4242 aa10.51□□□□□ -0.73
PHGDH-213ENST00000641272 FOXI1Q12951 378 aa10.51□□□□□ -0.73
PHGDH-213ENST00000641272 ODF1Q14990 250 aa10.51□□□□□ -0.73
PHGDH-213ENST00000641272 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
PHGDH-213ENST00000641272 TCTE3Q8IZS6 198 aa10.5□□□□□ -0.73
PHGDH-213ENST00000641272 CCL25O15444 150 aa10.49□□□□□ -0.73
PHGDH-213ENST00000641272 PMCHP20382 165 aa10.49□□□□□ -0.73
PHGDH-213ENST00000641272 TAGLN2P37802 199 aaKnown RBP10.49□□□□□ -0.73
PHGDH-213ENST00000641272 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
PHGDH-213ENST00000641272 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
PHGDH-213ENST00000641272 TSHBP01222 138 aa10.48□□□□□ -0.73
PHGDH-213ENST00000641272 ALKAL2Q6UX46 152 aa10.48□□□□□ -0.73
PHGDH-213ENST00000641272 TMEM101Q96IK0 257 aa10.48□□□□□ -0.73
PHGDH-213ENST00000641272 BTF3L4Q96K17 158 aa10.48□□□□□ -0.73
PHGDH-213ENST00000641272 H7C423 109 aa10.47□□□□□ -0.73
PHGDH-213ENST00000641272 I3L3M4 83 aa10.47□□□□□ -0.73
PHGDH-213ENST00000641272 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-213ENST00000641272 LINC00959A0A1B0GUT2 108 aa10.46□□□□□ -0.73
PHGDH-213ENST00000641272 TEX261Q6UWH6 196 aa10.46□□□□□ -0.73
PHGDH-213ENST00000641272 BORCS7Q96B45 105 aa10.46□□□□□ -0.73
PHGDH-213ENST00000641272 MRAP2Q96G30 205 aa10.46□□□□□ -0.73
PHGDH-213ENST00000641272 CARD19Q96LW7 228 aa10.46□□□□□ -0.73
PHGDH-213ENST00000641272 TRBV6-5A0A0K0K1A5 114 aa10.45□□□□□ -0.74
PHGDH-213ENST00000641272 A8MWL6 223 aa10.45□□□□□ -0.74
PHGDH-213ENST00000641272 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
PHGDH-213ENST00000641272 FAM231DQ6ZW35 169 aa10.45□□□□□ -0.74
PHGDH-213ENST00000641272 ST20Q9HBF5 79 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms