RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
CLN6-214ENST00000636314 COTL1Q14019 142 aa12.07□□□□□ -0.48
CLN6-214ENST00000636314 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
CLN6-214ENST00000636314 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
CLN6-214ENST00000636314 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
CLN6-214ENST00000636314 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
CLN6-214ENST00000636314 UBE2L6O14933 153 aa12.05□□□□□ -0.48
CLN6-214ENST00000636314 AMTP48728 403 aa12.05□□□□□ -0.48
CLN6-214ENST00000636314 DEFB104AQ8WTQ1 72 aa12.05□□□□□ -0.48
CLN6-214ENST00000636314 FOXA3P55318 350 aaPredicted RBP12.04□□□□□ -0.48
CLN6-214ENST00000636314 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
CLN6-214ENST00000636314 RPL39LQ96EH5 51 aaKnown RBP12.04□□□□□ -0.48
CLN6-214ENST00000636314 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
CLN6-214ENST00000636314 FAM30AQ9NZY2 134 aa12.04□□□□□ -0.48
CLN6-214ENST00000636314 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
CLN6-214ENST00000636314 REG3AQ06141 175 aa12.03□□□□□ -0.48
CLN6-214ENST00000636314 TEX261Q6UWH6 196 aa12.03□□□□□ -0.48
CLN6-214ENST00000636314 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
CLN6-214ENST00000636314 LINC01620Q4KN68 170 aa12.02□□□□□ -0.49
CLN6-214ENST00000636314 C20orf203Q8NBC4 194 aa12.02□□□□□ -0.49
CLN6-214ENST00000636314 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
CLN6-214ENST00000636314 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
CLN6-214ENST00000636314 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
CLN6-214ENST00000636314 FAM74A3Q4VXF1 159 aa12.01□□□□□ -0.49
CLN6-214ENST00000636314 Q6ZSA8 131 aa12.01□□□□□ -0.49
CLN6-214ENST00000636314 IGLV4-60A0A075B6I1 120 aa12□□□□□ -0.49
CLN6-214ENST00000636314 FAM231BA6NCW3 169 aa12□□□□□ -0.49
CLN6-214ENST00000636314 TMEM241Q24JQ0 296 aa12□□□□□ -0.49
CLN6-214ENST00000636314 ISOC2Q96AB3 205 aa12□□□□□ -0.49
CLN6-214ENST00000636314 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
CLN6-214ENST00000636314 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
CLN6-214ENST00000636314 NCR2O95944 276 aa11.99□□□□□ -0.49
CLN6-214ENST00000636314 PLA2G1BP04054 148 aaKnown RBP11.99□□□□□ -0.49
CLN6-214ENST00000636314 V9GYV3 84 aa11.99□□□□□ -0.49
CLN6-214ENST00000636314 TRAV8-4A0A0B4J246 113 aa11.98□□□□□ -0.49
CLN6-214ENST00000636314 APCSP02743 223 aa11.98□□□□□ -0.49
CLN6-214ENST00000636314 RPL23P62829 140 aaKnown RBP11.98□□□□□ -0.49
CLN6-214ENST00000636314 PEA15Q15121 130 aa11.98□□□□□ -0.49
CLN6-214ENST00000636314 ADIRFQ15847 76 aa11.98□□□□□ -0.49
CLN6-214ENST00000636314 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
CLN6-214ENST00000636314 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
CLN6-214ENST00000636314 C9JQL5 133 aa11.97□□□□□ -0.49
CLN6-214ENST00000636314 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
CLN6-214ENST00000636314 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.49
CLN6-214ENST00000636314 KRTAP29-1A8MX34 341 aaPredicted RBP11.96□□□□□ -0.49
CLN6-214ENST00000636314 SRSF3P84103 164 aaKnown RBP11.96□□□□□ -0.49
CLN6-214ENST00000636314 RIGQ13278 110 aa11.96□□□□□ -0.49
CLN6-214ENST00000636314 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.49
CLN6-214ENST00000636314 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
CLN6-214ENST00000636314 I3L3M4 83 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 PRSS1P07477 247 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 PMCHP20382 165 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 AMN1Q8IY45 258 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 NUP35Q8NFH5 326 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 SMDT1Q9H4I9 107 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 ST20Q9HBF5 79 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 NAT8BQ9UHF3 227 aa11.95□□□□□ -0.5
CLN6-214ENST00000636314 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.94□□□□□ -0.5
CLN6-214ENST00000636314 IGKV2-29A2NJV5 120 aaPredicted RBP11.94□□□□□ -0.5
CLN6-214ENST00000636314 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
CLN6-214ENST00000636314 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
CLN6-214ENST00000636314 SCXQ7RTU7 201 aa11.94□□□□□ -0.5
CLN6-214ENST00000636314 MRAP2Q96G30 205 aa11.94□□□□□ -0.5
CLN6-214ENST00000636314 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
CLN6-214ENST00000636314 H7C423 109 aa11.93□□□□□ -0.5
CLN6-214ENST00000636314 RAB4AP20338 218 aa11.93□□□□□ -0.5
CLN6-214ENST00000636314 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
CLN6-214ENST00000636314 FGF6P10767 208 aa11.92□□□□□ -0.5
CLN6-214ENST00000636314 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
CLN6-214ENST00000636314 CLRN3Q8NCR9 226 aa11.92□□□□□ -0.5
CLN6-214ENST00000636314 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
CLN6-214ENST00000636314 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
CLN6-214ENST00000636314 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
CLN6-214ENST00000636314 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
CLN6-214ENST00000636314 TSHBP01222 138 aa11.9□□□□□ -0.5
CLN6-214ENST00000636314 ZNF25P17030 456 aaPredicted RBP11.9□□□□□ -0.5
CLN6-214ENST00000636314 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
CLN6-214ENST00000636314 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
CLN6-214ENST00000636314 SERTAD4-AS1Q5TG53 156 aa11.89□□□□□ -0.51
CLN6-214ENST00000636314 BTF3L4Q96K17 158 aa11.89□□□□□ -0.51
CLN6-214ENST00000636314 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
CLN6-214ENST00000636314 GAGE12HA6NDE8 117 aa11.88□□□□□ -0.51
CLN6-214ENST00000636314 PPP1R17O96001 155 aa11.88□□□□□ -0.51
CLN6-214ENST00000636314 ESDP10768 282 aa11.88□□□□□ -0.51
CLN6-214ENST00000636314 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
CLN6-214ENST00000636314 C9orf163Q8N9P6 203 aa11.88□□□□□ -0.51
CLN6-214ENST00000636314 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
CLN6-214ENST00000636314 LRP1Q07954 4544 aaKnown RBP11.88□□□□□ -0.51
CLN6-214ENST00000636314 CAMPP49913 170 aa11.87□□□□□ -0.51
CLN6-214ENST00000636314 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
CLN6-214ENST00000636314 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
CLN6-214ENST00000636314 A0A1B0GW15 77 aa11.86□□□□□ -0.51
CLN6-214ENST00000636314 C7orf77A4D0Y5 90 aa11.86□□□□□ -0.51
CLN6-214ENST00000636314 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
CLN6-214ENST00000636314 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
CLN6-214ENST00000636314 CHCHD10Q8WYQ3 142 aaPredicted RBP11.86□□□□□ -0.51
CLN6-214ENST00000636314 FAT3Q8TDW7 4589 aa11.86□□□□□ -0.51
CLN6-214ENST00000636314 HMCN2Q8NDA2 5059 aa11.85□□□□□ -0.51
CLN6-214ENST00000636314 FCER1GP30273 86 aa11.85□□□□□ -0.51
CLN6-214ENST00000636314 SUMO2P61956 95 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms