RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PRELID3AQ96N28 172 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 GNB1LQ9BYB4 327 aa10.02□□□□□ -0.81
PNKP-221ENST00000627317 TRBV24-1A0A075B6N3 115 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 I3L3M4 83 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 PHOX2AO14813 284 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 NPYP01303 97 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 AMTP48728 403 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 IQCJQ1A5X6 159 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 LINC01556Q5JQF7 62 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 DEFB104AQ8WTQ1 72 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
PNKP-221ENST00000627317 A0A087WX48 190 aa10□□□□□ -0.81
PNKP-221ENST00000627317 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
PNKP-221ENST00000627317 PKIAP61925 76 aa10□□□□□ -0.81
PNKP-221ENST00000627317 LAMTOR2Q9Y2Q5 125 aa10□□□□□ -0.81
PNKP-221ENST00000627317 TRBV27A0A0K0K1C4 114 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 TMEM262E9PQX1 116 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 VCYO14598 125 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 FCER1GP30273 86 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 NIT1Q86X76 327 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 SMIM2Q9BVW6 85 aa9.99□□□□□ -0.81
PNKP-221ENST00000627317 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
PNKP-221ENST00000627317 K7EP13 123 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 UBE2L6O14933 153 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
PNKP-221ENST00000627317 GAGE6Q13070 117 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 KIAA1644Q3SXP7 199 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 KRTAP1-5Q9BYS1 174 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 KIAA1109Q2LD37 5005 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
PNKP-221ENST00000627317 PRSS29PA6NIE9 313 aa9.97□□□□□ -0.81
PNKP-221ENST00000627317 TSHBP01222 138 aa9.97□□□□□ -0.81
PNKP-221ENST00000627317 FABP9Q0Z7S8 132 aa9.97□□□□□ -0.81
PNKP-221ENST00000627317 Q8N3U1 123 aa9.97□□□□□ -0.81
PNKP-221ENST00000627317 CHCHD7Q9BUK0 85 aa9.97□□□□□ -0.81
PNKP-221ENST00000627317 TCAPO15273 167 aa9.96□□□□□ -0.82
PNKP-221ENST00000627317 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.82
PNKP-221ENST00000627317 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
PNKP-221ENST00000627317 DYNC1H1Q14204 4646 aaKnown RBP9.95□□□□□ -0.82
PNKP-221ENST00000627317 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
PNKP-221ENST00000627317 MPV17L2Q567V2 206 aa9.95□□□□□ -0.82
PNKP-221ENST00000627317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
PNKP-221ENST00000627317 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
PNKP-221ENST00000627317 ATP6V1G1O75348 118 aa9.94□□□□□ -0.82
PNKP-221ENST00000627317 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
PNKP-221ENST00000627317 SCO1O75880 301 aa9.93□□□□□ -0.82
PNKP-221ENST00000627317 RAB5AP20339 215 aa9.93□□□□□ -0.82
PNKP-221ENST00000627317 RBX1P62877 108 aa9.93□□□□□ -0.82
PNKP-221ENST00000627317 AMMECR1LQ6DCA0 310 aa9.93□□□□□ -0.82
PNKP-221ENST00000627317 Q8N976 141 aa9.93□□□□□ -0.82
PNKP-221ENST00000627317 KLK12Q9UKR0 248 aa9.93□□□□□ -0.82
PNKP-221ENST00000627317 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
PNKP-221ENST00000627317 H7C423 109 aa9.92□□□□□ -0.82
PNKP-221ENST00000627317 ANGP03950 147 aaKnown RBP9.92□□□□□ -0.82
PNKP-221ENST00000627317 ESDP10768 282 aa9.92□□□□□ -0.82
PNKP-221ENST00000627317 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
PNKP-221ENST00000627317 S100A1P23297 94 aa9.92□□□□□ -0.82
PNKP-221ENST00000627317 LAGE3Q14657 143 aa9.92□□□□□ -0.82
PNKP-221ENST00000627317 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
PNKP-221ENST00000627317 Q9HAA7 133 aa9.92□□□□□ -0.82
PNKP-221ENST00000627317 NXT2Q9NPJ8 142 aaKnown RBP9.92□□□□□ -0.82
PNKP-221ENST00000627317 PRSS47A8MTI9 375 aa9.91□□□□□ -0.82
PNKP-221ENST00000627317 RNASEKQ6P5S7 137 aaKnown RBP9.91□□□□□ -0.82
PNKP-221ENST00000627317 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
PNKP-221ENST00000627317 Q8N8P6 123 aa9.91□□□□□ -0.82
PNKP-221ENST00000627317 CRPP02741 224 aa9.9□□□□□ -0.82
PNKP-221ENST00000627317 FGF6P10767 208 aa9.9□□□□□ -0.82
PNKP-221ENST00000627317 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
PNKP-221ENST00000627317 UBE2WQ96B02 151 aa9.9□□□□□ -0.82
PNKP-221ENST00000627317 TMEM18Q96B42 140 aa9.9□□□□□ -0.82
PNKP-221ENST00000627317 TRAV8-3A0A0A6YYJ7 113 aa9.89□□□□□ -0.83
PNKP-221ENST00000627317 A0A1B0GUV1 79 aa9.89□□□□□ -0.83
PNKP-221ENST00000627317 ZNF25P17030 456 aaPredicted RBP9.89□□□□□ -0.83
PNKP-221ENST00000627317 IFI27P40305 119 aaPredicted RBP9.89□□□□□ -0.83
PNKP-221ENST00000627317 TNP2Q05952 138 aa9.89□□□□□ -0.83
PNKP-221ENST00000627317 PRSS3P2Q8NHM4 247 aa9.89□□□□□ -0.83
PNKP-221ENST00000627317 TMEM101Q96IK0 257 aa9.89□□□□□ -0.83
PNKP-221ENST00000627317 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
PNKP-221ENST00000627317 CLPSL2Q6UWE3 100 aa9.88□□□□□ -0.83
PNKP-221ENST00000627317 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
PNKP-221ENST00000627317 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
PNKP-221ENST00000627317 COLCA2A8K830 154 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 K7EMI3 77 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 Q0VG73 95 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 ORMDL2Q53FV1 153 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 DGAT2L7PQ6IED9 249 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 FA2HQ7L5A8 372 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 MRPL52Q86TS9 123 aaKnown RBP9.87□□□□□ -0.83
PNKP-221ENST00000627317 LINC00269Q8N2A0 174 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms