RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GAGE5Q13069 117 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 GAGE13Q4V321 117 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 RPL36ALQ969Q0 106 aaKnown RBP12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 TRBV7-3A0A075B6L6 115 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 A0A096LNJ9 63 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 TRAV10A0A0B4J240 114 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 GYPEP15421 78 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 VSIG2Q96IQ7 327 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 SMIM2Q9BVW6 85 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
PTCHD3-202ENST00000622555 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
PTCHD3-202ENST00000622555 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
PTCHD3-202ENST00000622555 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
PTCHD3-202ENST00000622555 NXT2Q9NPJ8 142 aaKnown RBP12.46□□□□□ -0.41
PTCHD3-202ENST00000622555 PAM16Q9Y3D7 125 aa12.46□□□□□ -0.41
PTCHD3-202ENST00000622555 VCYO14598 125 aa12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 PET117Q6UWS5 81 aa12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 Q8N8P6 123 aa12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 UBE2D3P61077 147 aa12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 UBE2D2P62837 147 aa12.45□□□□□ -0.42
PTCHD3-202ENST00000622555 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
PTCHD3-202ENST00000622555 IGHV3-38A0A0C4DH36 116 aa12.44□□□□□ -0.42
PTCHD3-202ENST00000622555 TRBV27A0A0K0K1C4 114 aa12.44□□□□□ -0.42
PTCHD3-202ENST00000622555 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
PTCHD3-202ENST00000622555 MIEN1Q9BRT3 115 aa12.44□□□□□ -0.42
PTCHD3-202ENST00000622555 I3L3M4 83 aa12.43□□□□□ -0.42
PTCHD3-202ENST00000622555 LINC00694P0DN24 101 aa12.43□□□□□ -0.42
PTCHD3-202ENST00000622555 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
PTCHD3-202ENST00000622555 TRAV9-2A0A087WT02 112 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 C20orf202A1L168 122 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 TCAPO15273 167 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 SPATA45Q537H7 98 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 DAZ4Q86SG3 579 aaKnown RBP12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 KIR2DL4Q99706 377 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 DAZ3Q9NR90 486 aaKnown RBP12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 ICOSQ9Y6W8 199 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 H3BNG1 76 aa12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
PTCHD3-202ENST00000622555 A0A096LPF7 62 aa12.41□□□□□ -0.42
PTCHD3-202ENST00000622555 HBDP02042 147 aa12.41□□□□□ -0.42
PTCHD3-202ENST00000622555 FCER1GP30273 86 aa12.41□□□□□ -0.42
PTCHD3-202ENST00000622555 LINC01545Q5VT33 79 aa12.41□□□□□ -0.42
PTCHD3-202ENST00000622555 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
PTCHD3-202ENST00000622555 NUDT3O95989 172 aa12.4□□□□□ -0.43
PTCHD3-202ENST00000622555 TSHBP01222 138 aa12.4□□□□□ -0.43
PTCHD3-202ENST00000622555 IGLC3P0DOY3 106 aa12.4□□□□□ -0.43
PTCHD3-202ENST00000622555 COTL1Q14019 142 aa12.4□□□□□ -0.43
PTCHD3-202ENST00000622555 ATOH7Q8N100 152 aa12.4□□□□□ -0.43
PTCHD3-202ENST00000622555 LAGE3Q14657 143 aa12.39□□□□□ -0.43
PTCHD3-202ENST00000622555 K7EMI3 77 aa12.38□□□□□ -0.43
PTCHD3-202ENST00000622555 MAJINQ3KP22 176 aa12.38□□□□□ -0.43
PTCHD3-202ENST00000622555 SH2D6Q7Z4S9 175 aa12.38□□□□□ -0.43
PTCHD3-202ENST00000622555 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
PTCHD3-202ENST00000622555 IGLL5B9A064 214 aa12.37□□□□□ -0.43
PTCHD3-202ENST00000622555 ORMDL2Q53FV1 153 aa12.37□□□□□ -0.43
PTCHD3-202ENST00000622555 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
PTCHD3-202ENST00000622555 UQCR10Q9UDW1 63 aa12.37□□□□□ -0.43
PTCHD3-202ENST00000622555 TGP01266 2768 aa12.36□□□□□ -0.43
PTCHD3-202ENST00000622555 LGALS9CQ6DKI2 356 aa12.35□□□□□ -0.43
PTCHD3-202ENST00000622555 CEMP1Q6PRD7 247 aaPredicted RBP12.35□□□□□ -0.43
PTCHD3-202ENST00000622555 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
PTCHD3-202ENST00000622555 C2orf88Q9BSF0 95 aa12.35□□□□□ -0.43
PTCHD3-202ENST00000622555 GTSF1LQ9H1H1 148 aa12.35□□□□□ -0.43
PTCHD3-202ENST00000622555 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
PTCHD3-202ENST00000622555 IFI27L1Q96BM0 104 aa12.34□□□□□ -0.43
PTCHD3-202ENST00000622555 NUPR2A6NF83 97 aa12.34□□□□□ -0.43
PTCHD3-202ENST00000622555 TMEM97Q5BJF2 176 aa12.34□□□□□ -0.43
PTCHD3-202ENST00000622555 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
PTCHD3-202ENST00000622555 CHCHD7Q9BUK0 85 aa12.33□□□□□ -0.44
PTCHD3-202ENST00000622555 TRBV25-1A0A075B6N4 114 aa12.32□□□□□ -0.44
PTCHD3-202ENST00000622555 TRBV6-8A0A0A6YYG3 113 aa12.32□□□□□ -0.44
PTCHD3-202ENST00000622555 M0R143 59 aa12.32□□□□□ -0.44
PTCHD3-202ENST00000622555 EREGO14944 169 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 KLK5Q9Y337 293 aaPredicted RBP12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 hDV102S1A0JD36 115 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 G0S2P27469 103 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 LYPD5Q6UWN5 251 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 C2orf66Q6UXQ4 117 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 TMEM243Q9BU79 118 aa12.31□□□□□ -0.44
PTCHD3-202ENST00000622555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.3□□□□□ -0.44
PTCHD3-202ENST00000622555 IGKV2-29A2NJV5 120 aaPredicted RBP12.3□□□□□ -0.44
PTCHD3-202ENST00000622555 RPL39P62891 51 aaKnown RBP12.3□□□□□ -0.44
PTCHD3-202ENST00000622555 CYSLTR1Q9Y271 337 aa12.3□□□□□ -0.44
PTCHD3-202ENST00000622555 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
PTCHD3-202ENST00000622555 WWC2-AS2Q96NR7 200 aa12.29□□□□□ -0.44
PTCHD3-202ENST00000622555 H0Y8G0 127 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 TIRAPP58753 221 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 ZFAND6Q6FIF0 208 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms