RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 STHQ8IWL8 128 aa12.69□□□□□ -0.38
CNOT3-209ENST00000617930 Q9UF83 564 aa12.69□□□□□ -0.38
CNOT3-209ENST00000617930 NOTCH3Q9UM47 2321 aa12.69□□□□□ -0.38
CNOT3-209ENST00000617930 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 TRBV6-5A0A0K0K1A5 114 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 E9PLD3 99 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 RPL32P62910 135 aaKnown RBP12.68□□□□□ -0.38
CNOT3-209ENST00000617930 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 LINC00467Q9BRT7 94 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 TP53TG1Q9Y2A0 90 aa12.68□□□□□ -0.38
CNOT3-209ENST00000617930 SDHAF1A6NFY7 115 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 INSP01308 110 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 LINC01549A6NIU2 74 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 G3V4G9 280 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 PF4P02776 101 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 Q6ZSN1 163 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 KIR2DL4Q99706 377 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 CMYA5Q8N3K9 4069 aa12.67□□□□□ -0.38
CNOT3-209ENST00000617930 P0DMU3 169 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 FAM231AP0DMU4 169 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 FAM231CP0DMU5 169 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 ZFP2Q6ZN57 461 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 ZNF815PA8K554 130 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 M0R2P5 195 aa12.66□□□□□ -0.38
CNOT3-209ENST00000617930 VCYO14598 125 aa12.65□□□□□ -0.38
CNOT3-209ENST00000617930 TSHBP01222 138 aa12.65□□□□□ -0.38
CNOT3-209ENST00000617930 RIPPLY3P57055 190 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 HERVK_113P61574 105 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 SCGB1D4Q6XE38 83 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 IGHV3OR16-12A0A075B7B8 117 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 RPL39P62891 51 aaKnown RBP12.64□□□□□ -0.39
CNOT3-209ENST00000617930 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
CNOT3-209ENST00000617930 ZNF415Q09FC8 603 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 CFAP126Q5VTH2 177 aa12.64□□□□□ -0.39
CNOT3-209ENST00000617930 MRPL16Q9NX20 251 aaKnown RBP12.64□□□□□ -0.39
CNOT3-209ENST00000617930 PMVKQ15126 192 aa12.63□□□□□ -0.39
CNOT3-209ENST00000617930 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
CNOT3-209ENST00000617930 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 PTH2Q96A98 100 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 IGIPA6NJ69 53 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 C11orf86A6NJI1 115 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 EMP1P54849 157 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 NACAE9PAV3 2078 aa12.62□□□□□ -0.39
CNOT3-209ENST00000617930 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 TMEM238LA0A1B0GVL6 79 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 A6NJY4 79 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 TIMM17AQ99595 171 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 A0A1B0GWB2 263 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 RPL35AP18077 110 aaKnown RBP12.61□□□□□ -0.39
CNOT3-209ENST00000617930 PIK3CD-AS1Q5SR53 167 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 PLEKHB2Q96CS7 222 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 EDA2RQ9HAV5 297 aa12.61□□□□□ -0.39
CNOT3-209ENST00000617930 SRSF9Q13242 221 aaKnown RBP eCLIP12.6□□□□□ -0.39
CNOT3-209ENST00000617930 A8MWV9 139 aa12.59□□□□□ -0.39
CNOT3-209ENST00000617930 F8W1H4 67 aa12.59□□□□□ -0.39
CNOT3-209ENST00000617930 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
CNOT3-209ENST00000617930 TEX48A0A1B0GUV7 120 aa12.59□□□□□ -0.39
CNOT3-209ENST00000617930 COL6A5A8TX70 2615 aa12.58□□□□□ -0.39
CNOT3-209ENST00000617930 H3BMG7 143 aa12.58□□□□□ -0.4
CNOT3-209ENST00000617930 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
CNOT3-209ENST00000617930 SPXQ9BT56 116 aa12.58□□□□□ -0.4
CNOT3-209ENST00000617930 PLAC8L1A1L4L8 177 aa12.57□□□□□ -0.4
CNOT3-209ENST00000617930 RS1O15537 224 aa12.57□□□□□ -0.4
CNOT3-209ENST00000617930 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
CNOT3-209ENST00000617930 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
CNOT3-209ENST00000617930 RHOHQ15669 191 aa12.56□□□□□ -0.4
CNOT3-209ENST00000617930 OPRPNQ99935 248 aaPredicted RBP12.56□□□□□ -0.4
CNOT3-209ENST00000617930 I3L3M4 83 aa12.55□□□□□ -0.4
CNOT3-209ENST00000617930 WFDC2Q14508 124 aa12.55□□□□□ -0.4
CNOT3-209ENST00000617930 GAGE13Q4V321 117 aa12.55□□□□□ -0.4
CNOT3-209ENST00000617930 Q6ZTI0 123 aa12.55□□□□□ -0.4
CNOT3-209ENST00000617930 PKD1L1Q8TDX9 2849 aa12.55□□□□□ -0.4
CNOT3-209ENST00000617930 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
CNOT3-209ENST00000617930 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
CNOT3-209ENST00000617930 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
CNOT3-209ENST00000617930 FAM104AQ969W3 186 aa12.54□□□□□ -0.4
CNOT3-209ENST00000617930 SPANXB1Q9NS25 103 aaPredicted RBP12.54□□□□□ -0.4
CNOT3-209ENST00000617930 TRGV1A0A0A0MS02 117 aa12.53□□□□□ -0.4
CNOT3-209ENST00000617930 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
CNOT3-209ENST00000617930 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
CNOT3-209ENST00000617930 ANK2Q01484 3957 aa12.53□□□□□ -0.4
CNOT3-209ENST00000617930 A0A0J9YY99 117 aa12.52□□□□□ -0.4
CNOT3-209ENST00000617930 J3QR89 54 aa12.52□□□□□ -0.4
CNOT3-209ENST00000617930 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.4
CNOT3-209ENST00000617930 MTURNQ8N3F0 131 aa12.52□□□□□ -0.4
CNOT3-209ENST00000617930 APOMO95445 188 aa12.52□□□□□ -0.41
CNOT3-209ENST00000617930 UBE2D1P51668 147 aa12.52□□□□□ -0.41
CNOT3-209ENST00000617930 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.41
CNOT3-209ENST00000617930 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
CNOT3-209ENST00000617930 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
CNOT3-209ENST00000617930 TSPAN13O95857 204 aa12.5□□□□□ -0.41
CNOT3-209ENST00000617930 TNFRSF18Q9Y5U5 241 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms