RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 Q8N7P7 452 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 ALPK3Q96L96 1907 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 TRBV27A0A0K0K1C4 114 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 CCKP06307 115 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 CRYGAP11844 174 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 PLA2G5P39877 138 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 COL4A3Q01955 1670 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 ZFAND3Q9H8U3 227 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 CLPSL2Q6UWE3 100 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 SEM1Q6ZVN7 128 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 CNFNQ9BYD5 112 aa5.17□□□□□ -1.58
CLCN3-211ENST00000613795 IGF1P05019 195 aa5.16□□□□□ -1.58
CLCN3-211ENST00000613795 MYO7BQ6PIF6 2116 aa5.16□□□□□ -1.58
CLCN3-211ENST00000613795 CGB7P0DN87 165 aa5.16□□□□□ -1.58
CLCN3-211ENST00000613795 CDKN2A-AS1Q9UH64 79 aa5.16□□□□□ -1.58
CLCN3-211ENST00000613795 SDK2Q58EX2 2172 aa5.15□□□□□ -1.58
CLCN3-211ENST00000613795 SPRNQ5BIV9 151 aa5.15□□□□□ -1.58
CLCN3-211ENST00000613795 Q6ZS46 218 aa5.15□□□□□ -1.58
CLCN3-211ENST00000613795 GRNP28799 593 aaKnown RBP5.15□□□□□ -1.58
CLCN3-211ENST00000613795 EBI3Q14213 229 aa5.15□□□□□ -1.59
CLCN3-211ENST00000613795 Q6YL49 198 aa5.15□□□□□ -1.59
CLCN3-211ENST00000613795 SMAD5-AS1Q9Y6J3 95 aa5.15□□□□□ -1.59
CLCN3-211ENST00000613795 SVILO95425 2214 aa5.15□□□□□ -1.59
CLCN3-211ENST00000613795 PI4KAP42356 2102 aa5.15□□□□□ -1.59
CLCN3-211ENST00000613795 PRO0255Q9UI72 69 aa5.15□□□□□ -1.59
CLCN3-211ENST00000613795 RTTNQ86VV8 2226 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 SLPIP03973 132 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 APRG1Q8IVJ8 170 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 MED12Q93074 2177 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 TMEM131Q92545 1883 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 F8W735 103 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-211ENST00000613795 ZFP36P26651 326 aaKnown RBP5.14□□□□□ -1.59
CLCN3-211ENST00000613795 CEMP1Q6PRD7 247 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-211ENST00000613795 ZFAND2AQ8N6M9 145 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 NCKAP5O14513 1909 aa5.14□□□□□ -1.59
CLCN3-211ENST00000613795 HEATR1Q9H583 2144 aaKnown RBP5.14□□□□□ -1.59
CLCN3-211ENST00000613795 SPAG11BQ08648 103 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 INTS1Q8N201 2190 aaKnown RBP5.13□□□□□ -1.59
CLCN3-211ENST00000613795 M0QY20 66 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 CRIP2P52943 208 aaPredicted RBP5.13□□□□□ -1.59
CLCN3-211ENST00000613795 SCXQ7RTU7 201 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 DIDO1Q9BTC0 2240 aaKnown RBP5.13□□□□□ -1.59
CLCN3-211ENST00000613795 MAP1BP46821 2468 aaKnown RBP5.13□□□□□ -1.59
CLCN3-211ENST00000613795 BCE1O60756 84 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 KIR2DL5BQ8NHK3 375 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 PRYO14603 147 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 MAP6D1Q9H9H5 199 aa5.13□□□□□ -1.59
CLCN3-211ENST00000613795 Q8NA96 180 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 DEFB136Q30KP8 78 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 LINC00467Q9BRT7 94 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 POLR2KP53803 58 aaKnown RBP5.12□□□□□ -1.59
CLCN3-211ENST00000613795 COL4A4P53420 1690 aaPredicted RBP5.12□□□□□ -1.59
CLCN3-211ENST00000613795 KIAA1549LQ6ZVL6 1849 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 RP1L1Q8IWN7 2480 aaPredicted RBP5.12□□□□□ -1.59
CLCN3-211ENST00000613795 A0A096LPF7 62 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 B9D2Q9BPU9 175 aa5.12□□□□□ -1.59
CLCN3-211ENST00000613795 TRBV7-6A0A0J9YX20 115 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
CLCN3-211ENST00000613795 LMO4P61968 165 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 SOSTDC1Q6X4U4 206 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 SMIM11BQ8TCY0 68 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 NUP210LQ5VU65 1888 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 IGIPA6NJ69 53 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 MUC7Q8TAX7 377 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 A0A1W2PNU3 283 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-211ENST00000613795 TSHBP01222 138 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 DENND4CQ5VZ89 1909 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 IGHV4-31P0DP07 118 aa5.11□□□□□ -1.59
CLCN3-211ENST00000613795 KIF26AQ9ULI4 1882 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-211ENST00000613795 LY6LH3BQJ8 138 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 K7ERS5 55 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 PRO0461Q9UI25 63 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 ICE1Q9Y2F5 2266 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 A0A087WVE0 104 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 A0A096LNJ9 63 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 ARHGAP21Q5T5U3 1957 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 FER1L5A0AVI2 2057 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 AHCTF1Q8WYP5 2266 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 HILS1P60008 231 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 PRO3102Q9H379 93 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 IGLV10-54A0A075B6I4 117 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 C6orf99Q4VX62 202 aa5.1□□□□□ -1.59
CLCN3-211ENST00000613795 IGLV4-69A0A075B6H9 119 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 H0Y9J4 135 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 K7EQG2 157 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 ESRGQ1W209 222 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 C11orf71Q6IPW1 123 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 ESM1Q9NQ30 184 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
CLCN3-211ENST00000613795 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.09□□□□□ -1.6
CLCN3-211ENST00000613795 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 SBSPONQ8IVN8 264 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 COX8CQ7Z4L0 72 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 A8MZ25 164 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 PSMG3-AS1Q96PY0 264 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 UBE2D4Q9Y2X8 147 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 TRBV6-4A0A1B0GX49 114 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms