RNA–Protein interactions for RNA: ENST00000613129.4

SURF4-208, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,148 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-208ENST00000613129 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
SURF4-208ENST00000613129 FBN2P35556 2912 aa12.24□□□□□ -0.45
SURF4-208ENST00000613129 RPL32P62910 135 aaKnown RBP12.24□□□□□ -0.45
SURF4-208ENST00000613129 LGALS9O00182 355 aa12.24□□□□□ -0.45
SURF4-208ENST00000613129 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
SURF4-208ENST00000613129 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
SURF4-208ENST00000613129 LITAFQ99732 161 aa12.23□□□□□ -0.45
SURF4-208ENST00000613129 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.23□□□□□ -0.45
SURF4-208ENST00000613129 I3L3M4 83 aa12.23□□□□□ -0.45
SURF4-208ENST00000613129 JMJD1CQ15652 2540 aa12.23□□□□□ -0.45
SURF4-208ENST00000613129 NXPH4O95158 308 aa12.22□□□□□ -0.45
SURF4-208ENST00000613129 DAZ1Q9NQZ3 744 aaKnown RBP12.22□□□□□ -0.45
SURF4-208ENST00000613129 RPL13AP40429 203 aaKnown RBP12.22□□□□□ -0.45
SURF4-208ENST00000613129 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
SURF4-208ENST00000613129 NIPBLQ6KC79 2804 aaeCLIP12.22□□□□□ -0.45
SURF4-208ENST00000613129 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
SURF4-208ENST00000613129 DCANP1Q8TF63 244 aa12.21□□□□□ -0.46
SURF4-208ENST00000613129 FAM104AQ969W3 186 aa12.21□□□□□ -0.46
SURF4-208ENST00000613129 RS1O15537 224 aa12.2□□□□□ -0.46
SURF4-208ENST00000613129 MXRA5Q9NR99 2828 aa12.2□□□□□ -0.46
SURF4-208ENST00000613129 Q6ZSN1 163 aa12.2□□□□□ -0.46
SURF4-208ENST00000613129 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
SURF4-208ENST00000613129 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
SURF4-208ENST00000613129 APRG1Q8IVJ8 170 aa12.19□□□□□ -0.46
SURF4-208ENST00000613129 FLNCQ14315 2725 aa12.18□□□□□ -0.46
SURF4-208ENST00000613129 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
SURF4-208ENST00000613129 NDUFA7O95182 113 aa12.18□□□□□ -0.46
SURF4-208ENST00000613129 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
SURF4-208ENST00000613129 NSUN5P1Q3KNT7 163 aa12.18□□□□□ -0.46
SURF4-208ENST00000613129 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
SURF4-208ENST00000613129 TRBV6-5A0A0K0K1A5 114 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 IGHV1-69P01742 117 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 IGHG2P01859 326 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 COX6CP09669 75 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 ID1P41134 155 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 RBMY1A1P0DJD3 496 aaKnown RBP12.17□□□□□ -0.46
SURF4-208ENST00000613129 RBMY1CP0DJD4 496 aa12.17□□□□□ -0.46
SURF4-208ENST00000613129 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
SURF4-208ENST00000613129 CDKN2A-AS1Q9UH64 79 aa12.16□□□□□ -0.46
SURF4-208ENST00000613129 SONP18583 2426 aaKnown RBP12.16□□□□□ -0.46
SURF4-208ENST00000613129 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
SURF4-208ENST00000613129 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
SURF4-208ENST00000613129 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
SURF4-208ENST00000613129 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.15□□□□□ -0.46
SURF4-208ENST00000613129 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
SURF4-208ENST00000613129 RHOHQ15669 191 aa12.15□□□□□ -0.46
SURF4-208ENST00000613129 KLK9Q2XQG4 91 aa12.15□□□□□ -0.46
SURF4-208ENST00000613129 Q8N2B8 174 aa12.15□□□□□ -0.47
SURF4-208ENST00000613129 TNFRSF18Q9Y5U5 241 aa12.15□□□□□ -0.47
SURF4-208ENST00000613129 AKAP9Q99996 3911 aa12.14□□□□□ -0.47
SURF4-208ENST00000613129 IGHV4-61A0A0C4DH41 118 aa12.14□□□□□ -0.47
SURF4-208ENST00000613129 K7ENP7 123 aa12.14□□□□□ -0.47
SURF4-208ENST00000613129 FBXL19-AS1Q494R0 122 aa12.14□□□□□ -0.47
SURF4-208ENST00000613129 A0A0J9YX75 114 aa12.14□□□□□ -0.47
SURF4-208ENST00000613129 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
SURF4-208ENST00000613129 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
SURF4-208ENST00000613129 MIAQ16674 131 aa12.13□□□□□ -0.47
SURF4-208ENST00000613129 TMEM61Q8N0U2 210 aa12.13□□□□□ -0.47
SURF4-208ENST00000613129 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
SURF4-208ENST00000613129 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
SURF4-208ENST00000613129 COX6A2Q02221 97 aa12.13□□□□□ -0.47
SURF4-208ENST00000613129 NF1P21359 2839 aa12.12□□□□□ -0.47
SURF4-208ENST00000613129 LST1O00453 97 aa12.12□□□□□ -0.47
SURF4-208ENST00000613129 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
SURF4-208ENST00000613129 CITED2Q99967 270 aaPredicted RBP12.12□□□□□ -0.47
SURF4-208ENST00000613129 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
SURF4-208ENST00000613129 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
SURF4-208ENST00000613129 MRPS36P82909 103 aaKnown RBP12.11□□□□□ -0.47
SURF4-208ENST00000613129 PPDPFQ9H3Y8 114 aa12.11□□□□□ -0.47
SURF4-208ENST00000613129 SNRPD3P62318 126 aaKnown RBP12.11□□□□□ -0.47
SURF4-208ENST00000613129 EPG5Q9HCE0 2579 aa12.1□□□□□ -0.47
SURF4-208ENST00000613129 Q9H8V8 135 aa12.1□□□□□ -0.47
SURF4-208ENST00000613129 Q9HAA7 133 aa12.1□□□□□ -0.47
SURF4-208ENST00000613129 BRI3O95415 125 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 FAM208BQ5VWN6 2430 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 AVPP01185 164 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 CFHR3Q02985 330 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 TRAV13-1A0A0B4J241 112 aa12.09□□□□□ -0.47
SURF4-208ENST00000613129 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
SURF4-208ENST00000613129 LY6DQ14210 128 aa12.08□□□□□ -0.48
SURF4-208ENST00000613129 MAPK1IP1LQ8NDC0 245 aa12.08□□□□□ -0.48
SURF4-208ENST00000613129 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
SURF4-208ENST00000613129 H3BT86 120 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 FN1P02751 2386 aaKnown RBP12.07□□□□□ -0.48
SURF4-208ENST00000613129 LOC107984640A0A0U1RRK4 108 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 M0QXV9 152 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
SURF4-208ENST00000613129 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 Q6Q795 121 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 CHCHD7Q9BUK0 85 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
SURF4-208ENST00000613129 DEFB131AP59861 70 aa12.06□□□□□ -0.48
SURF4-208ENST00000613129 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
SURF4-208ENST00000613129 NAV2Q8IVL1 2488 aa12.06□□□□□ -0.48
SURF4-208ENST00000613129 MYO18BQ8IUG5 2567 aa12.06□□□□□ -0.48
SURF4-208ENST00000613129 CACNA1AO00555 2505 aa12.06□□□□□ -0.48
SURF4-208ENST00000613129 DAZ2Q13117 558 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms