RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SDIM1Q6ZPB5 146 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 PANO1I0J062 215 aa11.4□□□□□ -0.58
SSBP1-215ENST00000612337 CNBPP62633 177 aaKnown RBP11.4□□□□□ -0.58
SSBP1-215ENST00000612337 PGLYRP4Q96LB8 373 aa11.4□□□□□ -0.58
SSBP1-215ENST00000612337 TMEM243Q9BU79 118 aa11.4□□□□□ -0.58
SSBP1-215ENST00000612337 TRGC1P0CF51 173 aa11.39□□□□□ -0.59
SSBP1-215ENST00000612337 HNRNPA3P51991 378 aaKnown RBP11.39□□□□□ -0.59
SSBP1-215ENST00000612337 BLOC1S1P78537 153 aa11.39□□□□□ -0.59
SSBP1-215ENST00000612337 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
SSBP1-215ENST00000612337 IGLV4-60A0A075B6I1 120 aa11.38□□□□□ -0.59
SSBP1-215ENST00000612337 hDV102S1A0JD36 115 aa11.38□□□□□ -0.59
SSBP1-215ENST00000612337 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
SSBP1-215ENST00000612337 GFRA4Q9GZZ7 299 aa11.38□□□□□ -0.59
SSBP1-215ENST00000612337 DPH3P1Q9H4G8 78 aa11.38□□□□□ -0.59
SSBP1-215ENST00000612337 NIT2Q9NQR4 276 aa11.38□□□□□ -0.59
SSBP1-215ENST00000612337 NTF3P20783 257 aa11.37□□□□□ -0.59
SSBP1-215ENST00000612337 CIRBPQ14011 172 aaKnown RBP11.37□□□□□ -0.59
SSBP1-215ENST00000612337 NUDT10Q8NFP7 164 aa11.37□□□□□ -0.59
SSBP1-215ENST00000612337 LYPD6BQ8NI32 183 aa11.37□□□□□ -0.59
SSBP1-215ENST00000612337 NUDT11Q96G61 164 aa11.37□□□□□ -0.59
SSBP1-215ENST00000612337 WDR73Q6P4I2 378 aa11.36□□□□□ -0.59
SSBP1-215ENST00000612337 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
SSBP1-215ENST00000612337 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
SSBP1-215ENST00000612337 UBE2L6O14933 153 aa11.35□□□□□ -0.59
SSBP1-215ENST00000612337 CTRLP40313 264 aa11.35□□□□□ -0.59
SSBP1-215ENST00000612337 COTL1Q14019 142 aa11.35□□□□□ -0.59
SSBP1-215ENST00000612337 IGHV3-64A0A075B6Q5 118 aa11.34□□□□□ -0.59
SSBP1-215ENST00000612337 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
SSBP1-215ENST00000612337 TMEM250H0YL14 139 aa11.34□□□□□ -0.59
SSBP1-215ENST00000612337 K7EN84 100 aa11.34□□□□□ -0.59
SSBP1-215ENST00000612337 SLPIP03973 132 aa11.34□□□□□ -0.59
SSBP1-215ENST00000612337 AMTP48728 403 aa11.34□□□□□ -0.59
SSBP1-215ENST00000612337 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
SSBP1-215ENST00000612337 TNXBP22105 4242 aa11.33□□□□□ -0.6
SSBP1-215ENST00000612337 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
SSBP1-215ENST00000612337 PLA2G2DQ9UNK4 145 aa11.33□□□□□ -0.6
SSBP1-215ENST00000612337 TWIST1Q15672 202 aa11.32□□□□□ -0.6
SSBP1-215ENST00000612337 RNF185Q96GF1 192 aa11.32□□□□□ -0.6
SSBP1-215ENST00000612337 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
SSBP1-215ENST00000612337 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
SSBP1-215ENST00000612337 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
SSBP1-215ENST00000612337 Q6ZRU5 148 aa11.3□□□□□ -0.6
SSBP1-215ENST00000612337 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
SSBP1-215ENST00000612337 DPH3Q96FX2 82 aa11.3□□□□□ -0.6
SSBP1-215ENST00000612337 A0A087WYN8 130 aa11.29□□□□□ -0.6
SSBP1-215ENST00000612337 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
SSBP1-215ENST00000612337 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
SSBP1-215ENST00000612337 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
SSBP1-215ENST00000612337 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
SSBP1-215ENST00000612337 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
SSBP1-215ENST00000612337 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
SSBP1-215ENST00000612337 NCR2O95944 276 aa11.27□□□□□ -0.61
SSBP1-215ENST00000612337 MT1HL1P0DM35 61 aa11.27□□□□□ -0.61
SSBP1-215ENST00000612337 CEBPGP53567 150 aa11.27□□□□□ -0.61
SSBP1-215ENST00000612337 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
SSBP1-215ENST00000612337 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
SSBP1-215ENST00000612337 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.61
SSBP1-215ENST00000612337 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.61
SSBP1-215ENST00000612337 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
SSBP1-215ENST00000612337 H7C423 109 aa11.26□□□□□ -0.61
SSBP1-215ENST00000612337 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
SSBP1-215ENST00000612337 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-215ENST00000612337 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
SSBP1-215ENST00000612337 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
SSBP1-215ENST00000612337 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
SSBP1-215ENST00000612337 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
SSBP1-215ENST00000612337 RPS10P46783 165 aaKnown RBP11.25□□□□□ -0.61
SSBP1-215ENST00000612337 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
SSBP1-215ENST00000612337 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-215ENST00000612337 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
SSBP1-215ENST00000612337 A8MWL6 223 aa11.24□□□□□ -0.61
SSBP1-215ENST00000612337 APCSP02743 223 aa11.24□□□□□ -0.61
SSBP1-215ENST00000612337 COX6A2Q02221 97 aa11.24□□□□□ -0.61
SSBP1-215ENST00000612337 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
SSBP1-215ENST00000612337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-215ENST00000612337 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-215ENST00000612337 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
SSBP1-215ENST00000612337 SRP19P09132 144 aaKnown RBP11.23□□□□□ -0.61
SSBP1-215ENST00000612337 FOXA3P55318 350 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-215ENST00000612337 HIGD2BQ4VC39 106 aa11.23□□□□□ -0.61
SSBP1-215ENST00000612337 CT83Q5H943 113 aa11.23□□□□□ -0.61
SSBP1-215ENST00000612337 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-215ENST00000612337 PHOX2AO14813 284 aa11.22□□□□□ -0.61
SSBP1-215ENST00000612337 FGF6P10767 208 aa11.22□□□□□ -0.61
SSBP1-215ENST00000612337 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
SSBP1-215ENST00000612337 PRSS3P2Q8NHM4 247 aa11.22□□□□□ -0.61
SSBP1-215ENST00000612337 C7orf33Q8WU49 177 aa11.22□□□□□ -0.61
SSBP1-215ENST00000612337 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
SSBP1-215ENST00000612337 ZNF25P17030 456 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-215ENST00000612337 LRP2P98164 4655 aa11.2□□□□□ -0.62
SSBP1-215ENST00000612337 I3L3M4 83 aa11.2□□□□□ -0.62
SSBP1-215ENST00000612337 FOXI1Q12951 378 aa11.2□□□□□ -0.62
SSBP1-215ENST00000612337 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
SSBP1-215ENST00000612337 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
SSBP1-215ENST00000612337 TRBV6-5A0A0K0K1A5 114 aa11.19□□□□□ -0.62
SSBP1-215ENST00000612337 FAM231BA6NCW3 169 aa11.19□□□□□ -0.62
SSBP1-215ENST00000612337 PMCHP20382 165 aa11.19□□□□□ -0.62
SSBP1-215ENST00000612337 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms