RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 BASP1P80723 227 aaKnown RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 SLC38A11Q08AI6 406 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 C2orf54Q08AI8 447 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 WHAMMP3Q1A5X7 153 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 LRRC23Q53EV4 343 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 TMEM78Q5T7P6 136 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CFAP126Q5VTH2 177 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 SOSTDC1Q6X4U4 206 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 Q6ZQT7 251 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 LCA10Q71F78 164 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 AKAP14Q86UN6 197 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 LINC00269Q8N2A0 174 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 OR8J3Q8NGG0 315 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 OR5AK3PQ8NH89 298 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 PLPPR1Q8TBJ4 325 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 DYNC2LI1Q8TCX1 351 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 ZNF431Q8TF32 576 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 FAM19A4Q96LR4 140 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 ERMAPQ96PL5 475 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 PDCD10Q9BUL8 212 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TMEM109Q9BVC6 243 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 MRPS26Q9BYN8 205 aaKnown RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 C20orf27Q9GZN8 174 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 C12orf4Q9NQ89 552 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 MED9Q9NWA0 146 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 LAMTOR3Q9UHA4 124 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 AK3Q9UIJ7 227 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RAB22AQ9UL26 194 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 C22orf24Q9Y442 160 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TRBV6-7A0A0A0MS04 114 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TGIF2-C20orf24A0A0A6YYL0 155 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TEX50A0A1B0GTY4 177 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 H3BN98 237 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RFXANKO14593 260 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CASQ2O14958 399 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 PPP1R2P9O14990 202 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 SCO1O75880 301 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 NPPAP01160 153 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 IGKV1-39P01597 117 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 PRH1P02810 166 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 IGKV1D-39P04432 117 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 C2P06681 752 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CXCL1P09341 107 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 GPX2P18283 190 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CXCL3P19876 107 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 ALOX5APP20292 161 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RAB3AP20336 220 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RAB5AP20339 215 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 GADD45AP24522 165 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 F2RP25116 425 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 S100PP25815 95 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 ATP6V1E1P36543 226 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 ZNF80P51504 273 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 NKX2-5P52952 324 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 FXYD7P58549 80 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 PPP3R1P63098 170 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 ZNF345Q14585 488 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 LTC4SQ16873 150 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CCDC153Q494R4 210 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 DNAL1Q4LDG9 190 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RPL39P5Q59GN2 51 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 PDZD11Q5EBL8 140 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 NMSQ5H8A3 153 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 C1orf195Q5TG92 126 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 GDF5OSQ5U4N7 250 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 HACD4Q5VWC8 232 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TMEM236Q5W0B7 351 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 GLYATQ6IB77 296 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 Q6JHZ5 121 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 LPCAT3Q6P1A2 487 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CLPSL2Q6UWE3 100 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TMPRSS11AQ6ZMR5 421 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 FAM19A5Q7Z5A7 132 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 SPATA24Q86W54 205 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 BPIFA4PQ86YQ2 179 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 NECAB1Q8N987 351 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 GATD1Q8NB37 220 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 BPIFB6Q8NFQ5 453 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 OR51E1Q8TCB6 317 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 GNPDA2Q8TDQ7 276 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TNFAIP8L1Q8WVP5 186 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 PYDC1Q8WXC3 89 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 MT1LQ93083 61 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CIB3Q96Q77 187 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 DERL3Q96Q80 235 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RSG1Q9BU20 258 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 NKX6-2Q9C056 277 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 AGPAT4-IT1Q9H0P7 198 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RAB17Q9H0T7 212 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RERGLQ9H628 205 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 HAUS4Q9H6D7 363 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 TPT1P8Q9HAU6 139 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 NPVFQ9HCQ7 196 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 MRPL16Q9NX20 251 aaKnown RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 SCN3BQ9NY72 215 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 DNAJC27Q9NZQ0 273 aa0.08□□□□□ -2.4
CEP290-208ENST00000604024 RABL2AQ9UBK7 228 aaPredicted RBP0.08□□□□□ -2.4
CEP290-208ENST00000604024 CKLFQ9UBR5 152 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms