RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 REG3AQ06141 175 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 CIRBPQ14011 172 aaKnown RBP5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 C20orf203Q8NBC4 194 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 CLRN3Q8NCR9 226 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 FAM213BQ8TBF2 198 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 SFT2D1Q8WV19 159 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 GTSF1Q8WW33 167 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 MLST8Q9BVC4 326 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 TPPP3Q9BW30 176 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 SSBP4Q9BWG4 385 aaPredicted RBP5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
SMARCA4-218ENST00000592158 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
SMARCA4-218ENST00000592158 IGHV3-64A0A075B6Q5 118 aa5.35□□□□□ -1.55
SMARCA4-218ENST00000592158 G3V3Q6 166 aa5.35□□□□□ -1.55
SMARCA4-218ENST00000592158 GZMBP10144 247 aa5.35□□□□□ -1.55
SMARCA4-218ENST00000592158 IQCJQ1A5X6 159 aa5.35□□□□□ -1.55
SMARCA4-218ENST00000592158 AP5S1Q9NUS5 200 aa5.35□□□□□ -1.55
SMARCA4-218ENST00000592158 IGLV4-60A0A075B6I1 120 aa5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 SMLR1H3BR10 107 aa5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 NKX2-5P52952 324 aaPredicted RBP5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 RNF185Q96GF1 192 aa5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 TMEM243Q9BU79 118 aa5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
SMARCA4-218ENST00000592158 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 TRAV8-4A0A0B4J246 113 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 HMSDA8MTL9 139 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 M0QY20 66 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 UBE2L6O14933 153 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 P01737 135 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 SLPIP03973 132 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 RPL35P42766 123 aaKnown RBP5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 ZNF345Q14585 488 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 TMUB2Q71RG4 321 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 TCTE3Q8IZS6 198 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 KCNRGQ8N5I3 272 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 FER1L6-AS1Q8NA97 138 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 MBD3L1Q8WWY6 194 aa5.33□□□□□ -1.56
SMARCA4-218ENST00000592158 IGKV3OR2-268A0A0C4DH90 116 aa5.32□□□□□ -1.56
SMARCA4-218ENST00000592158 UMAD1C9J7I0 102 aa5.32□□□□□ -1.56
SMARCA4-218ENST00000592158 SULT1A2P50226 295 aa5.32□□□□□ -1.56
SMARCA4-218ENST00000592158 RASL11AQ6T310 242 aa5.32□□□□□ -1.56
SMARCA4-218ENST00000592158 OR2D3Q8NGH3 330 aa5.32□□□□□ -1.56
SMARCA4-218ENST00000592158 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 H2AFB1P0C5Y9 115 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 IGLC6P0CF74 106 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 AMTP48728 403 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 HIGD2BQ4VC39 106 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 CENPWQ5EE01 88 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 C15orf56Q8N910 161 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 GNG13Q9P2W3 67 aa5.31□□□□□ -1.56
SMARCA4-218ENST00000592158 IGKV2-24A0A0C4DH68 120 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 RPS20P60866 119 aaKnown RBP5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 COX6A2Q02221 97 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 COTL1Q14019 142 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 MAJINQ3KP22 176 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 PGLYRP4Q96LB8 373 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 MANBALQ9NQG1 85 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 NIT2Q9NQR4 276 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
SMARCA4-218ENST00000592158 KANTRA0A1W2PQU2 76 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 XKRY2A2RUG3 117 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 C19orf71A6NCJ1 209 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 BCL2L11O43521 198 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 TRGC1P0CF51 173 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 GNG4P50150 75 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 CCL20P78556 96 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 CFAP161Q6P656 301 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 LYZL1Q6UWQ5 148 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 PRSS3P2Q8NHM4 247 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 LYPD6BQ8NI32 183 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
SMARCA4-218ENST00000592158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 RAB19A4D1S5 217 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 F2Z2F3 143 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 NDUFS6O75380 124 aaKnown RBP5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 TSPAN13O95857 204 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 IFNA1P01562 189 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 NTF3P20783 257 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 AMMECR1LQ6DCA0 310 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 STPG4Q8N801 248 aa5.28□□□□□ -1.56
SMARCA4-218ENST00000592158 RNASEKQ6P5S7 137 aaKnown RBP5.27□□□□□ -1.57
SMARCA4-218ENST00000592158 AKAP14Q86UN6 197 aa5.27□□□□□ -1.57
SMARCA4-218ENST00000592158 CHCHD10Q8WYQ3 142 aaPredicted RBP5.27□□□□□ -1.57
SMARCA4-218ENST00000592158 TRBV20OR9-2A0A075B6H5 130 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 A0A096LNI7 61 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 APCSP02743 223 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 CTRLP40313 264 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 EIF5AP63241 154 aaKnown RBP5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 TWIST1Q15672 202 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 GATD1Q8NB37 220 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 RPL39LQ96EH5 51 aaKnown RBP5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 SMIM12Q96EX1 92 aa5.26□□□□□ -1.57
SMARCA4-218ENST00000592158 MED9Q9NWA0 146 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms