RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 UTP20O75691 2785 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 ZANQ9Y493 2812 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 A0A0J9YXY3 114 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 A8MWV9 139 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 B5MCH6 92 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 FSHBP01225 129 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 CDIP1Q9H305 208 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 SLURP1P55000 103 aa10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 CREBBPQ92793 2442 aa10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 USP9YO00507 2555 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-237ENST00000585163 DEFB136Q30KP8 78 aa10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 CEMP1Q6PRD7 247 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 DUX3Q96PT4 197 aa10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 PRM2P04554 102 aa10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 C18orf65Q6ZTR6 163 aa10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 Q9UF83 564 aa10.35□□□□□ -0.75
CDK5RAP3-237ENST00000585163 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 PIEZO1Q92508 2521 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 MXRA5Q9NR99 2828 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 FHL3Q13643 280 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 BEX4Q9NWD9 120 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 IGSF10Q6WRI0 2623 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 Q6ZSN1 163 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 LITAFQ99732 161 aa10.34□□□□□ -0.75
CDK5RAP3-237ENST00000585163 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 IGHV1-58A0A0C4DH39 117 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ZNF415Q09FC8 603 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 TMEM61Q8N0U2 210 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ANKRD17O75179 2603 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ADARB2-AS1A8MUL3 147 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-237ENST00000585163 F8WDY8 70 aa10.32□□□□□ -0.76
CDK5RAP3-237ENST00000585163 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ANKRD29Q8N6D5 301 aa10.32□□□□□ -0.76
CDK5RAP3-237ENST00000585163 FBN2P35556 2912 aa10.32□□□□□ -0.76
CDK5RAP3-237ENST00000585163 TINCRA0A1B0GVN0 87 aa10.32□□□□□ -0.76
CDK5RAP3-237ENST00000585163 SLC25A20O43772 301 aa10.32□□□□□ -0.76
CDK5RAP3-237ENST00000585163 H7C2G1 150 aa10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 Q8N2B8 174 aa10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 C11orf72Q8NBR9 251 aa10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 IGHV4-31P0DP07 118 aa10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
CDK5RAP3-237ENST00000585163 C9JAW5 83 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 IGHV3-53P01767 116 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 MAP6D1Q9H9H5 199 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
CDK5RAP3-237ENST00000585163 MYO18BQ8IUG5 2567 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 Q1RN00 199 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ADAMTSL4-AS1Q5T5F5 129 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 Q6ZUT4 128 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 LINC01587Q99440 93 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 BEAN1Q3B7T3 259 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
CDK5RAP3-237ENST00000585163 CACNA1AO00555 2505 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 PRSS2P07478 247 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 XGP55808 180 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 POLQO75417 2590 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 MT-ATP8P03928 68 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
CDK5RAP3-237ENST00000585163 CR1P17927 2039 aa10.27□□□□□ -0.76
CDK5RAP3-237ENST00000585163 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
CDK5RAP3-237ENST00000585163 A8MZ25 164 aa10.27□□□□□ -0.77
CDK5RAP3-237ENST00000585163 INSP01308 110 aa10.27□□□□□ -0.77
CDK5RAP3-237ENST00000585163 MIAQ16674 131 aa10.27□□□□□ -0.77
CDK5RAP3-237ENST00000585163 DEFB114Q30KQ6 69 aa10.27□□□□□ -0.77
CDK5RAP3-237ENST00000585163 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
CDK5RAP3-237ENST00000585163 RS1O15537 224 aa10.26□□□□□ -0.77
CDK5RAP3-237ENST00000585163 TRIAP1O43715 76 aa10.26□□□□□ -0.77
CDK5RAP3-237ENST00000585163 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
CDK5RAP3-237ENST00000585163 DYNLRB2Q8TF09 96 aa10.26□□□□□ -0.77
CDK5RAP3-237ENST00000585163 LINC01600Q96MT4 127 aa10.26□□□□□ -0.77
CDK5RAP3-237ENST00000585163 ACACBO00763 2458 aa10.26□□□□□ -0.77
CDK5RAP3-237ENST00000585163 TMEM262E9PQX1 116 aa10.25□□□□□ -0.77
CDK5RAP3-237ENST00000585163 KHDC1LQ5JSQ8 128 aa10.25□□□□□ -0.77
CDK5RAP3-237ENST00000585163 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
CDK5RAP3-237ENST00000585163 CDKN2A-AS1Q9UH64 79 aa10.24□□□□□ -0.77
CDK5RAP3-237ENST00000585163 TIMM17BO60830 172 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms