RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 WNK1Q9H4A3 2382 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 J3QKU1 62 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 UQCRQO14949 82 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 BLCAPP62952 87 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 ANKRD29Q8N6D5 301 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 MYOZ3Q8TDC0 251 aa8.7□□□□□ -1.02
CDK5RAP3-231ENST00000584063 DEFB113Q30KQ7 82 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 UNQ9165/PRO28630Q6UXU0 137 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 HIST1H4GQ99525 98 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 TRAV13-1A0A0B4J241 112 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 IGHV7-4-1A0A0J9YVY3 117 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 LINC01356Q8N9X3 169 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 NXT2Q9NPJ8 142 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 NACAE9PAV3 2078 aa8.69□□□□□ -1.02
CDK5RAP3-231ENST00000584063 GNRH2O43555 120 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 SLC25A16P16260 332 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 DSCR9P59020 149 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 M0R2P5 195 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 LAGE3Q14657 143 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 C5orf56Q8N8D9 126 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 NRACQ8N912 160 aa8.68□□□□□ -1.02
CDK5RAP3-231ENST00000584063 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 Q8N8P6 123 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 ATP5G1P05496 136 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 KLHL30-AS1Q8NEE0 82 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 METTL26Q96S19 204 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 JMJD1CQ15652 2540 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 CEND1Q8N111 149 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 MOB4Q9Y3A3 225 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 C2CD3Q4AC94 2353 aa8.67□□□□□ -1.02
CDK5RAP3-231ENST00000584063 SPATA3Q8NHX4 192 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 PRO0461Q9UI25 63 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 MUC4Q99102 2169 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 HIVEP2P31629 2446 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 ZNF688P0C7X2 276 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 TMEM258P61165 79 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
CDK5RAP3-231ENST00000584063 TRACP01848 142 aa8.65□□□□□ -1.02
CDK5RAP3-231ENST00000584063 PHLDA1Q8WV24 401 aaPredicted RBP8.65□□□□□ -1.03
CDK5RAP3-231ENST00000584063 TRAV41A0A0B4J266 112 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 IGLL5B9A064 214 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 CNFNQ9BYD5 112 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 A8MWV9 139 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 PHLDA3Q9Y5J5 127 aa8.64□□□□□ -1.03
CDK5RAP3-231ENST00000584063 PDZD2O15018 2839 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 IGHV4-31P0DP07 118 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 HLA-DRB4P13762 266 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 HLA-DRB4X5D2U9 266 aa8.63□□□□□ -1.03
CDK5RAP3-231ENST00000584063 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
CDK5RAP3-231ENST00000584063 CD7P09564 240 aa8.62□□□□□ -1.03
CDK5RAP3-231ENST00000584063 FAM74A4Q5TZK3 123 aa8.62□□□□□ -1.03
CDK5RAP3-231ENST00000584063 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
CDK5RAP3-231ENST00000584063 RPL39P62891 51 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-231ENST00000584063 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
CDK5RAP3-231ENST00000584063 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 A0A096LNT2 108 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 F5H697 171 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.033e-6■■■■□ 20.4
CDK5RAP3-231ENST00000584063 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 SUMO2P61956 95 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 RRN3P1Q2M238 152 aa8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
CDK5RAP3-231ENST00000584063 CRYGAP11844 174 aa8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 FN1P02751 2386 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 AKAP9Q99996 3911 aa8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
CDK5RAP3-231ENST00000584063 hADV29S1A0JD25 119 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 A6NDX4 124 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 F8VRH5 84 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 HTN1P15515 57 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 CR1P17927 2039 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 TRBV7-1A0A0A6YYK4 115 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 E9PLD3 99 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 ASIPP42127 132 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 C19orf54Q5BKX5 351 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms