RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 XGP55808 180 aa6.77□□□□□ -1.33
PPP4R1-220ENST00000581835 DEFB104AQ8WTQ1 72 aa6.77□□□□□ -1.33
PPP4R1-220ENST00000581835 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
PPP4R1-220ENST00000581835 PRR34Q9NV39 138 aa6.77□□□□□ -1.33
PPP4R1-220ENST00000581835 COTL1Q14019 142 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 MIAQ16674 131 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 Q8N1X5 172 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 NUP35Q8NFH5 326 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 TMEM243Q9BU79 118 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 C1orf43Q9BWL3 253 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 TMEM191AQ9H0A3 160 aa6.76□□□□□ -1.33
PPP4R1-220ENST00000581835 A0A1B0GUV1 79 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 AMTP48728 403 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 CLPSL2Q6UWE3 100 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 LINC00269Q8N2A0 174 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 NAT8BQ9UHF3 227 aa6.75□□□□□ -1.33
PPP4R1-220ENST00000581835 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 TRBV6-5A0A0K0K1A5 114 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 SMIM27A0A1W2PRY6 76 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 SDHAF1A6NFY7 115 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 NCR2O95944 276 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 RAB4AP20338 218 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 RIGQ13278 110 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
PPP4R1-220ENST00000581835 UBE2L6O14933 153 aa6.73□□□□□ -1.33
PPP4R1-220ENST00000581835 REG3AQ06141 175 aa6.73□□□□□ -1.33
PPP4R1-220ENST00000581835 I3L3M4 83 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 PMCHP20382 165 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 RPS10P46783 165 aaKnown RBP6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 RAB14P61106 215 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 ST20Q9HBF5 79 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 VPS13BQ7Z7G8 4022 aa6.72□□□□□ -1.33
PPP4R1-220ENST00000581835 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.34
PPP4R1-220ENST00000581835 H7C423 109 aa6.71□□□□□ -1.34
PPP4R1-220ENST00000581835 HLA-DQA1P01909 254 aa6.71□□□□□ -1.34
PPP4R1-220ENST00000581835 APCSP02743 223 aa6.71□□□□□ -1.34
PPP4R1-220ENST00000581835 C14orf177Q52M58 125 aa6.71□□□□□ -1.34
PPP4R1-220ENST00000581835 FAM30AQ9NZY2 134 aa6.71□□□□□ -1.34
PPP4R1-220ENST00000581835 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 TRBV27A0A0K0K1C4 114 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 A0A1B0GW15 77 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 USP17L23D6RBM5 183 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 SMKR1H3BMG3 65 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 TSHBP01222 138 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 ESDP10768 282 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 CAMPP49913 170 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 HAMPP81172 84 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 LINC01620Q4KN68 170 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 CLLU1Q5K131 121 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 FAM104BQ5XKR9 115 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 Q6ZSA8 131 aa6.7□□□□□ -1.34
PPP4R1-220ENST00000581835 EPM2AB3EWF7 344 aa6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 FGF6P10767 208 aa6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 IFITM2Q01629 132 aa6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 MRPL54Q6P161 138 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 NRACQ8N912 160 aa6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
PPP4R1-220ENST00000581835 SRRM2Q9UQ35 2752 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 A0A1B0GXF2 115 aa6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 VCYO14598 125 aa6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 PPP1R2P9O14990 202 aa6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 PPP1R17O96001 155 aa6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 PRSS1P07477 247 aa6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 PNRC1Q12796 327 aaPredicted RBP6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 RNASEKQ6P5S7 137 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-220ENST00000581835 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
PPP4R1-220ENST00000581835 LINC00862A6NCI5 91 aa6.67□□□□□ -1.34
PPP4R1-220ENST00000581835 ZNF25P17030 456 aaPredicted RBP6.67□□□□□ -1.34
PPP4R1-220ENST00000581835 SUMO2P61956 95 aaKnown RBP6.67□□□□□ -1.34
PPP4R1-220ENST00000581835 HBBP68871 147 aa6.67□□□□□ -1.34
PPP4R1-220ENST00000581835 TRBV24-1A0A075B6N3 115 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 C7orf77A4D0Y5 90 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 S100A8P05109 93 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 CKS2P33552 79 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 Q5VSD8 79 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 DGAT2L7PQ6IED9 249 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 MRPL52Q86TS9 123 aaKnown RBP6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 CLRN3Q8NCR9 226 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 OR5A1Q8NGJ0 315 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 ANAPC16Q96DE5 110 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 BTF3L4Q96K17 158 aa6.66□□□□□ -1.34
PPP4R1-220ENST00000581835 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-220ENST00000581835 GAGE12HA6NDE8 117 aa6.65□□□□□ -1.34
PPP4R1-220ENST00000581835 F8W036 122 aa6.65□□□□□ -1.34
PPP4R1-220ENST00000581835 MT-ND4LP03901 98 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms