RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 COTL1Q14019 142 aa16.47■□□□□ 0.23
CDC42EP4-205ENST00000580315 Q8N976 141 aa16.47■□□□□ 0.23
CDC42EP4-205ENST00000580315 TMEM243Q9BU79 118 aa16.47■□□□□ 0.23
CDC42EP4-205ENST00000580315 MYCBP2O75592 4640 aa16.47■□□□□ 0.23
CDC42EP4-205ENST00000580315 SRRM2Q9UQ35 2752 aaKnown RBP16.46■□□□□ 0.23
CDC42EP4-205ENST00000580315 GCSHP23434 173 aa16.46■□□□□ 0.23
CDC42EP4-205ENST00000580315 RBX1P62877 108 aa16.46■□□□□ 0.23
CDC42EP4-205ENST00000580315 C1orf43Q9BWL3 253 aa16.46■□□□□ 0.23
CDC42EP4-205ENST00000580315 RIGQ13278 110 aa16.45■□□□□ 0.22
CDC42EP4-205ENST00000580315 ENHOQ6UWT2 76 aa16.45■□□□□ 0.22
CDC42EP4-205ENST00000580315 TMEM191AQ9H0A3 160 aa16.45■□□□□ 0.22
CDC42EP4-205ENST00000580315 NAT8BQ9UHF3 227 aa16.45■□□□□ 0.22
CDC42EP4-205ENST00000580315 AMTP48728 403 aa16.44■□□□□ 0.22
CDC42EP4-205ENST00000580315 NUP35Q8NFH5 326 aa16.44■□□□□ 0.22
CDC42EP4-205ENST00000580315 BAALCQ8WXS3 180 aa16.44■□□□□ 0.22
CDC42EP4-205ENST00000580315 RPL39LQ96EH5 51 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-205ENST00000580315 UBE2L6O14933 153 aa16.43■□□□□ 0.22
CDC42EP4-205ENST00000580315 LECT2O14960 151 aa16.43■□□□□ 0.22
CDC42EP4-205ENST00000580315 MIAQ16674 131 aa16.43■□□□□ 0.22
CDC42EP4-205ENST00000580315 VPS13BQ7Z7G8 4022 aa16.42■□□□□ 0.22
CDC42EP4-205ENST00000580315 WFDC2Q14508 124 aa16.42■□□□□ 0.22
CDC42EP4-205ENST00000580315 DEFB104AQ8WTQ1 72 aa16.41■□□□□ 0.22
CDC42EP4-205ENST00000580315 FLG2Q5D862 2391 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP4-205ENST00000580315 SDHAF1A6NFY7 115 aa16.4■□□□□ 0.22
CDC42EP4-205ENST00000580315 NCR2O95944 276 aa16.4■□□□□ 0.22
CDC42EP4-205ENST00000580315 LINC00269Q8N2A0 174 aa16.4■□□□□ 0.22
CDC42EP4-205ENST00000580315 PRR34Q9NV39 138 aa16.4■□□□□ 0.22
CDC42EP4-205ENST00000580315 A0A1B0GUV1 79 aa16.39■□□□□ 0.21
CDC42EP4-205ENST00000580315 SMR3BP02814 79 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-205ENST00000580315 MRAP2Q96G30 205 aa16.39■□□□□ 0.21
CDC42EP4-205ENST00000580315 TRBV6-5A0A0K0K1A5 114 aa16.38■□□□□ 0.21
CDC42EP4-205ENST00000580315 SMIM27A0A1W2PRY6 76 aa16.38■□□□□ 0.21
CDC42EP4-205ENST00000580315 CLPSL2Q6UWE3 100 aa16.38■□□□□ 0.21
CDC42EP4-205ENST00000580315 APCSP02743 223 aa16.37■□□□□ 0.21
CDC42EP4-205ENST00000580315 RAB4AP20338 218 aa16.37■□□□□ 0.21
CDC42EP4-205ENST00000580315 AMN1Q8IY45 258 aa16.37■□□□□ 0.21
CDC42EP4-205ENST00000580315 ST20Q9HBF5 79 aa16.37■□□□□ 0.21
CDC42EP4-205ENST00000580315 I3L3M4 83 aa16.36■□□□□ 0.21
CDC42EP4-205ENST00000580315 PMCHP20382 165 aa16.36■□□□□ 0.21
CDC42EP4-205ENST00000580315 REG3AQ06141 175 aa16.36■□□□□ 0.21
CDC42EP4-205ENST00000580315 RNF185Q96GF1 192 aa16.36■□□□□ 0.21
CDC42EP4-205ENST00000580315 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-205ENST00000580315 A0A1B0GW15 77 aa16.35■□□□□ 0.21
CDC42EP4-205ENST00000580315 C14orf177Q52M58 125 aa16.35■□□□□ 0.21
CDC42EP4-205ENST00000580315 C20orf203Q8NBC4 194 aa16.34■□□□□ 0.21
CDC42EP4-205ENST00000580315 IGLV4-60A0A075B6I1 120 aa16.33■□□□□ 0.2
CDC42EP4-205ENST00000580315 PPP1R17O96001 155 aa16.33■□□□□ 0.2
CDC42EP4-205ENST00000580315 HLA-DQA1P01909 254 aa16.33■□□□□ 0.2
CDC42EP4-205ENST00000580315 CLLU1Q5K131 121 aa16.33■□□□□ 0.2
CDC42EP4-205ENST00000580315 AMMECR1LQ6DCA0 310 aa16.33■□□□□ 0.2
CDC42EP4-205ENST00000580315 FAM229AH3BQW9 127 aa16.32■□□□□ 0.2
CDC42EP4-205ENST00000580315 H7C423 109 aa16.32■□□□□ 0.2
CDC42EP4-205ENST00000580315 GAS8-AS1O95177 125 aa16.32■□□□□ 0.2
CDC42EP4-205ENST00000580315 CAMPP49913 170 aa16.32■□□□□ 0.2
CDC42EP4-205ENST00000580315 HAMPP81172 84 aa16.32■□□□□ 0.2
CDC42EP4-205ENST00000580315 TMEM70Q9BUB7 260 aa16.32■□□□□ 0.2
CDC42EP4-205ENST00000580315 TRAV8-4A0A0B4J246 113 aa16.31■□□□□ 0.2
CDC42EP4-205ENST00000580315 PPP1R2P9O14990 202 aa16.31■□□□□ 0.2
CDC42EP4-205ENST00000580315 S100A8P05109 93 aa16.31■□□□□ 0.2
CDC42EP4-205ENST00000580315 RPS10P46783 165 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-205ENST00000580315 PNRC1Q12796 327 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP4-205ENST00000580315 FAM104BQ5XKR9 115 aa16.3■□□□□ 0.2
CDC42EP4-205ENST00000580315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-205ENST00000580315 IGKV2-29A2NJV5 120 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-205ENST00000580315 IGLV10-54A0A075B6I4 117 aa16.28■□□□□ 0.2
CDC42EP4-205ENST00000580315 SMKR1H3BMG3 65 aa16.28■□□□□ 0.2
CDC42EP4-205ENST00000580315 POLR2KP53803 58 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-205ENST00000580315 RNASEKQ6P5S7 137 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-205ENST00000580315 TMEM242Q9NWH2 141 aa16.28■□□□□ 0.2
CDC42EP4-205ENST00000580315 TRBV27A0A0K0K1C4 114 aa16.27■□□□□ 0.2
CDC42EP4-205ENST00000580315 USP17L23D6RBM5 183 aa16.27■□□□□ 0.2
CDC42EP4-205ENST00000580315 HBBP68871 147 aa16.27■□□□□ 0.2
CDC42EP4-205ENST00000580315 MRPL54Q6P161 138 aaKnown RBP16.27■□□□□ 0.2
CDC42EP4-205ENST00000580315 F8W036 122 aa16.26■□□□□ 0.19
CDC42EP4-205ENST00000580315 VCYO14598 125 aa16.26■□□□□ 0.19
CDC42EP4-205ENST00000580315 TSHBP01222 138 aa16.26■□□□□ 0.19
CDC42EP4-205ENST00000580315 FGF6P10767 208 aa16.26■□□□□ 0.19
CDC42EP4-205ENST00000580315 MRPL51Q4U2R6 128 aaKnown RBP16.26■□□□□ 0.19
CDC42EP4-205ENST00000580315 LINC00862A6NCI5 91 aa16.25■□□□□ 0.19
CDC42EP4-205ENST00000580315 MT-ND4LP03901 98 aa16.25■□□□□ 0.19
CDC42EP4-205ENST00000580315 ZNF25P17030 456 aaPredicted RBP16.25■□□□□ 0.19
CDC42EP4-205ENST00000580315 KRTAP26-1Q6PEX3 210 aa16.25■□□□□ 0.19
CDC42EP4-205ENST00000580315 BTF3L4Q96K17 158 aa16.25■□□□□ 0.19
CDC42EP4-205ENST00000580315 SUMO2P61956 95 aaKnown RBP16.24■□□□□ 0.19
CDC42EP4-205ENST00000580315 NRACQ8N912 160 aa16.24■□□□□ 0.19
CDC42EP4-205ENST00000580315 ANAPC16Q96DE5 110 aa16.24■□□□□ 0.19
CDC42EP4-205ENST00000580315 TMEM101Q96IK0 257 aa16.24■□□□□ 0.19
CDC42EP4-205ENST00000580315 ESDP10768 282 aa16.23■□□□□ 0.19
CDC42EP4-205ENST00000580315 FCER1GP30273 86 aa16.23■□□□□ 0.19
CDC42EP4-205ENST00000580315 CKS2P33552 79 aa16.23■□□□□ 0.19
CDC42EP4-205ENST00000580315 ATP5L2Q7Z4Y8 100 aa16.23■□□□□ 0.19
CDC42EP4-205ENST00000580315 A0A1B0GXF2 115 aa16.22■□□□□ 0.19
CDC42EP4-205ENST00000580315 IFITM2Q01629 132 aa16.22■□□□□ 0.19
CDC42EP4-205ENST00000580315 KIR2DL4Q99706 377 aa16.22■□□□□ 0.19
CDC42EP4-205ENST00000580315 IGKV3OR2-268A0A0C4DH90 116 aa16.21■□□□□ 0.19
CDC42EP4-205ENST00000580315 UQCC3Q6UW78 93 aa16.21■□□□□ 0.19
CDC42EP4-205ENST00000580315 C7orf77A4D0Y5 90 aa16.2■□□□□ 0.18
CDC42EP4-205ENST00000580315 CLRN3Q8NCR9 226 aa16.2■□□□□ 0.18
CDC42EP4-205ENST00000580315 OR5A1Q8NGJ0 315 aa16.2■□□□□ 0.18
CDC42EP4-205ENST00000580315 C20orf78Q9BR46 151 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms