RNA–Protein interactions for RNA: ENST00000578340.4

AC116003.1-201, humanhuman

TSL 3 BASIC

Gene AC116003.1, Length 536 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.1-201ENST00000578340 HLA-DQA1P01909 254 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 SRSF3P84103 164 aaKnown RBP10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 MIAQ16674 131 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 Q5VSD8 79 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 TEX261Q6UWH6 196 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 C20orf203Q8NBC4 194 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
AC116003.1-201ENST00000578340 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
AC116003.1-201ENST00000578340 COTL1Q14019 142 aa10.52□□□□□ -0.73
AC116003.1-201ENST00000578340 GFRA4Q9GZZ7 299 aa10.52□□□□□ -0.73
AC116003.1-201ENST00000578340 GAS8-AS1O95177 125 aa10.51□□□□□ -0.73
AC116003.1-201ENST00000578340 AMTP48728 403 aa10.51□□□□□ -0.73
AC116003.1-201ENST00000578340 REG3AQ06141 175 aa10.51□□□□□ -0.73
AC116003.1-201ENST00000578340 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
AC116003.1-201ENST00000578340 FRZBQ92765 325 aa10.51□□□□□ -0.73
AC116003.1-201ENST00000578340 V9GYV3 84 aa10.51□□□□□ -0.73
AC116003.1-201ENST00000578340 IGLV10-54A0A075B6I4 117 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 USP17L23D6RBM5 183 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 RPL23P62829 140 aaKnown RBP10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 Q6ZSA8 131 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 ISOC2Q96AB3 205 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 BORCS7Q96B45 105 aa10.5□□□□□ -0.73
AC116003.1-201ENST00000578340 UBE2L6O14933 153 aa10.49□□□□□ -0.73
AC116003.1-201ENST00000578340 FAM74A3Q4VXF1 159 aa10.49□□□□□ -0.73
AC116003.1-201ENST00000578340 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
AC116003.1-201ENST00000578340 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
AC116003.1-201ENST00000578340 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
AC116003.1-201ENST00000578340 ADIRFQ15847 76 aa10.48□□□□□ -0.73
AC116003.1-201ENST00000578340 C14orf177Q52M58 125 aa10.48□□□□□ -0.73
AC116003.1-201ENST00000578340 SRRM2Q9UQ35 2752 aaKnown RBP10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 PRSS1P07477 247 aa10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 PEA15Q15121 130 aa10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 TMEM191AQ9H0A3 160 aa10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 NAT8Q9UHE5 227 aa10.47□□□□□ -0.73
AC116003.1-201ENST00000578340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.46□□□□□ -0.73
AC116003.1-201ENST00000578340 IGKV2-29A2NJV5 120 aaPredicted RBP10.46□□□□□ -0.73
AC116003.1-201ENST00000578340 AMN1Q8IY45 258 aa10.46□□□□□ -0.73
AC116003.1-201ENST00000578340 TRBV6-5A0A0K0K1A5 114 aa10.45□□□□□ -0.74
AC116003.1-201ENST00000578340 NCR2O95944 276 aa10.45□□□□□ -0.74
AC116003.1-201ENST00000578340 APCSP02743 223 aa10.45□□□□□ -0.74
AC116003.1-201ENST00000578340 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
AC116003.1-201ENST00000578340 RAB4AP20338 218 aa10.45□□□□□ -0.74
AC116003.1-201ENST00000578340 RPS10P46783 165 aaKnown RBP10.45□□□□□ -0.74
AC116003.1-201ENST00000578340 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
AC116003.1-201ENST00000578340 FAM229AH3BQW9 127 aa10.44□□□□□ -0.74
AC116003.1-201ENST00000578340 PMCHP20382 165 aa10.44□□□□□ -0.74
AC116003.1-201ENST00000578340 RIGQ13278 110 aa10.44□□□□□ -0.74
AC116003.1-201ENST00000578340 ST20Q9HBF5 79 aa10.44□□□□□ -0.74
AC116003.1-201ENST00000578340 FLG2Q5D862 2391 aaPredicted RBP10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 I3L3M4 83 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 SMDT1Q9H4I9 107 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 NAT8BQ9UHF3 227 aa10.43□□□□□ -0.74
AC116003.1-201ENST00000578340 TSHBP01222 138 aa10.42□□□□□ -0.74
AC116003.1-201ENST00000578340 RNASEKQ6P5S7 137 aaKnown RBP10.42□□□□□ -0.74
AC116003.1-201ENST00000578340 MRAP2Q96G30 205 aa10.42□□□□□ -0.74
AC116003.1-201ENST00000578340 TMEM242Q9NWH2 141 aa10.42□□□□□ -0.74
AC116003.1-201ENST00000578340 SMIM27A0A1W2PRY6 76 aa10.41□□□□□ -0.74
AC116003.1-201ENST00000578340 FGF6P10767 208 aa10.41□□□□□ -0.74
AC116003.1-201ENST00000578340 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
AC116003.1-201ENST00000578340 H7C423 109 aa10.4□□□□□ -0.74
AC116003.1-201ENST00000578340 LINC00528Q8N1L1 170 aa10.4□□□□□ -0.74
AC116003.1-201ENST00000578340 CHAC1Q9BUX1 264 aa10.4□□□□□ -0.74
AC116003.1-201ENST00000578340 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
AC116003.1-201ENST00000578340 ESDP10768 282 aa10.39□□□□□ -0.75
AC116003.1-201ENST00000578340 CAMPP49913 170 aa10.39□□□□□ -0.75
AC116003.1-201ENST00000578340 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
AC116003.1-201ENST00000578340 NRACQ8N912 160 aa10.39□□□□□ -0.75
AC116003.1-201ENST00000578340 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
AC116003.1-201ENST00000578340 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
AC116003.1-201ENST00000578340 hDV102S1A0JD36 115 aa10.38□□□□□ -0.75
AC116003.1-201ENST00000578340 MRPL51Q4U2R6 128 aaKnown RBP10.38□□□□□ -0.75
AC116003.1-201ENST00000578340 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
AC116003.1-201ENST00000578340 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
AC116003.1-201ENST00000578340 CLRN3Q8NCR9 226 aa10.38□□□□□ -0.75
AC116003.1-201ENST00000578340 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
AC116003.1-201ENST00000578340 SLPIP03973 132 aa10.36□□□□□ -0.75
AC116003.1-201ENST00000578340 ZNF25P17030 456 aaPredicted RBP10.36□□□□□ -0.75
AC116003.1-201ENST00000578340 MRPL54Q6P161 138 aaKnown RBP10.36□□□□□ -0.75
AC116003.1-201ENST00000578340 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
AC116003.1-201ENST00000578340 VCYO14598 125 aa10.35□□□□□ -0.75
AC116003.1-201ENST00000578340 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
AC116003.1-201ENST00000578340 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
AC116003.1-201ENST00000578340 OR5A1Q8NGJ0 315 aa10.35□□□□□ -0.75
AC116003.1-201ENST00000578340 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
AC116003.1-201ENST00000578340 BTF3L4Q96K17 158 aa10.35□□□□□ -0.75
AC116003.1-201ENST00000578340 MYCBP2O75592 4640 aa10.34□□□□□ -0.75
AC116003.1-201ENST00000578340 C7orf77A4D0Y5 90 aa10.34□□□□□ -0.75
AC116003.1-201ENST00000578340 PANO1I0J062 215 aa10.34□□□□□ -0.75
AC116003.1-201ENST00000578340 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms