RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SRIP30626 198 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 Q0VG73 95 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 OR10J3Q5JRS4 329 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 SH2D6Q7Z4S9 175 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.58□□□□□ -1.52
COPS3-215ENST00000578317 PHLDA1Q8WV24 401 aaPredicted RBP5.58□□□□□ -1.52
COPS3-215ENST00000578317 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 TNFRSF18Q9Y5U5 241 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 SDHAF1A6NFY7 115 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 K7EMI3 77 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 NCR2O95944 276 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 LINC00694P0DN24 101 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 HTN3P15516 51 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 UBE2D3P61077 147 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 UBE2D2P62837 147 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
COPS3-215ENST00000578317 DAZ4Q86SG3 579 aaKnown RBP5.57□□□□□ -1.52
COPS3-215ENST00000578317 ZNRF2Q8NHG8 242 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 RPL39LQ96EH5 51 aaKnown RBP5.57□□□□□ -1.52
COPS3-215ENST00000578317 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
COPS3-215ENST00000578317 DAZ3Q9NR90 486 aaKnown RBP5.57□□□□□ -1.52
COPS3-215ENST00000578317 IGLV2-18A0A075B6J9 118 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 TCAPO15273 167 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
COPS3-215ENST00000578317 CEMP1Q6PRD7 247 aaPredicted RBP5.56□□□□□ -1.52
COPS3-215ENST00000578317 C18orf32Q8TCD1 76 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 MAP1LC3AQ9H492 121 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 NXT2Q9NPJ8 142 aaKnown RBP5.56□□□□□ -1.52
COPS3-215ENST00000578317 CSMD3Q7Z407 3707 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 A0A096LPF7 62 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 A0A0J9YY99 117 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 GAGE12JA6NER3 117 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 LINC01546A6NGU7 62 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 I3L3M4 83 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 TCTAP57738 103 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 RAB5BP61020 215 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 GAGE1Q13065 139 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 GAGE4Q13068 117 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 GAGE5Q13069 117 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 COA6Q5JTJ3 125 aaKnown RBP5.56□□□□□ -1.52
COPS3-215ENST00000578317 Q8N8P6 123 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 C15orf53Q8NAA6 179 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 ICOSQ9Y6W8 199 aa5.56□□□□□ -1.52
COPS3-215ENST00000578317 VPS13DQ5THJ4 4388 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 LOC100131303A0A0U1RQF7 123 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 NUPR2A6NF83 97 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 LINC00614P0C842 121 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 PMCHP20382 165 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 TMEM97Q5BJF2 176 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 ATP6V0E2Q8NHE4 81 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 KIR2DL4Q99706 377 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 GTSF1LQ9H1H1 148 aa5.55□□□□□ -1.52
COPS3-215ENST00000578317 STARD9Q9P2P6 4700 aa5.54□□□□□ -1.52
COPS3-215ENST00000578317 LOC389332A0A1B0GUA5 103 aa5.54□□□□□ -1.52
COPS3-215ENST00000578317 IFI27P40305 119 aaPredicted RBP5.54□□□□□ -1.52
COPS3-215ENST00000578317 NEGR1Q7Z3B1 354 aa5.54□□□□□ -1.52
COPS3-215ENST00000578317 NIT1Q86X76 327 aa5.54□□□□□ -1.52
COPS3-215ENST00000578317 KLK5Q9Y337 293 aaPredicted RBP5.54□□□□□ -1.52
COPS3-215ENST00000578317 NACAE9PAV3 2078 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 IGLL5B9A064 214 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 G0S2P27469 103 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 BAGE3Q86Y29 109 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 MUC7Q8TAX7 377 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
COPS3-215ENST00000578317 URB1-AS1Q96HZ7 61 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 DNAH1Q9P2D7 4330 aa5.53□□□□□ -1.52
COPS3-215ENST00000578317 TRBV6-8A0A0A6YYG3 113 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 TSHBP01222 138 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 ESDP10768 282 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 COTL1Q14019 142 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 IQCJQ1A5X6 159 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 LYPD5Q6UWN5 251 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 NTM-AS1Q6ZSK4 140 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 TENM2Q9NT68 2774 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 LINC01549A6NIU2 74 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 LAGE3Q14657 143 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 FA2HQ7L5A8 372 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 APLNQ9ULZ1 77 aa5.52□□□□□ -1.53
COPS3-215ENST00000578317 IGHV3-38A0A0C4DH36 116 aa5.51□□□□□ -1.53
COPS3-215ENST00000578317 NUDT3O95989 172 aa5.51□□□□□ -1.53
COPS3-215ENST00000578317 FCER1GP30273 86 aa5.51□□□□□ -1.53
COPS3-215ENST00000578317 ESRGQ1W209 222 aa5.51□□□□□ -1.53
COPS3-215ENST00000578317 LELP1Q5T871 98 aa5.51□□□□□ -1.53
COPS3-215ENST00000578317 Q8N1X5 172 aa5.51□□□□□ -1.53
COPS3-215ENST00000578317 TRBV25-1A0A075B6N4 114 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms