RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 Q6ZSV7 163 aa12.78□□□□□ -0.36
SCARF1-205ENST00000571272 MRPS36P82909 103 aaKnown RBP12.77□□□□□ -0.36
SCARF1-205ENST00000571272 ATXN8Q156A1 80 aa12.77□□□□□ -0.36
SCARF1-205ENST00000571272 CUBNO60494 3623 aa12.77□□□□□ -0.37
SCARF1-205ENST00000571272 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
SCARF1-205ENST00000571272 TMEM262E9PQX1 116 aa12.77□□□□□ -0.37
SCARF1-205ENST00000571272 NDUFA12Q9UI09 145 aa12.77□□□□□ -0.37
SCARF1-205ENST00000571272 Q6ZSN1 163 aa12.76□□□□□ -0.37
SCARF1-205ENST00000571272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
SCARF1-205ENST00000571272 TEX49A0A1B0GTD5 131 aa12.76□□□□□ -0.37
SCARF1-205ENST00000571272 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
SCARF1-205ENST00000571272 DEFB131AP59861 70 aa12.76□□□□□ -0.37
SCARF1-205ENST00000571272 MAPK1IP1LQ8NDC0 245 aa12.76□□□□□ -0.37
SCARF1-205ENST00000571272 PYGO1Q9Y3Y4 419 aa12.76□□□□□ -0.37
SCARF1-205ENST00000571272 CENPEQ02224 2701 aa12.76□□□□□ -0.37
SCARF1-205ENST00000571272 RNF183Q96D59 192 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 IGHV3-38A0A0C4DH36 116 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 IGHV1-58A0A0C4DH39 117 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 DUX3Q96PT4 197 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 NOTCH3Q9UM47 2321 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 DEFB136Q30KP8 78 aa12.75□□□□□ -0.37
SCARF1-205ENST00000571272 DOPEY1Q5JWR5 2465 aa12.74□□□□□ -0.37
SCARF1-205ENST00000571272 ZFAND6Q6FIF0 208 aa12.73□□□□□ -0.37
SCARF1-205ENST00000571272 TRBV30A0A0K0K1B3 111 aa12.73□□□□□ -0.37
SCARF1-205ENST00000571272 TEX29Q8N6K0 151 aa12.73□□□□□ -0.37
SCARF1-205ENST00000571272 MXRA5Q9NR99 2828 aa12.73□□□□□ -0.37
SCARF1-205ENST00000571272 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
SCARF1-205ENST00000571272 DAND5Q8N907 189 aa12.72□□□□□ -0.37
SCARF1-205ENST00000571272 VSIG2Q96IQ7 327 aa12.72□□□□□ -0.37
SCARF1-205ENST00000571272 GATA3P23771 443 aa12.72□□□□□ -0.37
SCARF1-205ENST00000571272 CHCHD7Q9BUK0 85 aa12.72□□□□□ -0.37
SCARF1-205ENST00000571272 MYO18BQ8IUG5 2567 aa12.72□□□□□ -0.37
SCARF1-205ENST00000571272 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.37
SCARF1-205ENST00000571272 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.37
SCARF1-205ENST00000571272 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.37
SCARF1-205ENST00000571272 SLURP1P55000 103 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 ANAPC13Q9BS18 74 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 ICOSQ9Y6W8 199 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 M0QXV9 152 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 LINC00467Q9BRT7 94 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 ACACBO00763 2458 aa12.71□□□□□ -0.37
SCARF1-205ENST00000571272 TRBV10-2A0A0K0K1G8 114 aa12.71□□□□□ -0.38
SCARF1-205ENST00000571272 CRLF1O75462 422 aa12.71□□□□□ -0.38
SCARF1-205ENST00000571272 ANKRD17O75179 2603 aaKnown RBP12.7□□□□□ -0.38
SCARF1-205ENST00000571272 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
SCARF1-205ENST00000571272 CLEC2BQ92478 149 aa12.7□□□□□ -0.38
SCARF1-205ENST00000571272 PRORYQ9H606 182 aa12.7□□□□□ -0.38
SCARF1-205ENST00000571272 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 TINCRA0A1B0GVN0 87 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 H3BMM0 161 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 MIAQ16674 131 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 CITED1Q99966 193 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 CACNA1AO00555 2505 aa12.69□□□□□ -0.38
SCARF1-205ENST00000571272 RNF152Q8N8N0 203 aa12.68□□□□□ -0.38
SCARF1-205ENST00000571272 EDA2RQ9HAV5 297 aa12.68□□□□□ -0.38
SCARF1-205ENST00000571272 FAM208BQ5VWN6 2430 aa12.68□□□□□ -0.38
SCARF1-205ENST00000571272 SNCGO76070 127 aa12.68□□□□□ -0.38
SCARF1-205ENST00000571272 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
SCARF1-205ENST00000571272 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
SCARF1-205ENST00000571272 H7C423 109 aa12.67□□□□□ -0.38
SCARF1-205ENST00000571272 UBE2E2Q96LR5 201 aa12.67□□□□□ -0.38
SCARF1-205ENST00000571272 UBE2WQ96B02 151 aa12.67□□□□□ -0.38
SCARF1-205ENST00000571272 LINC01587Q99440 93 aa12.67□□□□□ -0.38
SCARF1-205ENST00000571272 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
SCARF1-205ENST00000571272 TRAV8-4A0A0B4J246 113 aa12.67□□□□□ -0.38
SCARF1-205ENST00000571272 COX6CP09669 75 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 ZNF415Q09FC8 603 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 GAGE2BQ13066 116 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 GAGE2EQ4V326 116 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 GAGE2DQ9UEU5 116 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 WNK1Q9H4A3 2382 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 A0A0U1RRA0 63 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
SCARF1-205ENST00000571272 LINC01356Q8N9X3 169 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 ZNF702PQ9H963 129 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
SCARF1-205ENST00000571272 RPL13AP40429 203 aaKnown RBP12.65□□□□□ -0.38
SCARF1-205ENST00000571272 ZNF625Q96I27 306 aaPredicted RBP12.65□□□□□ -0.38
SCARF1-205ENST00000571272 TLN2Q9Y4G6 2542 aa12.64□□□□□ -0.39
SCARF1-205ENST00000571272 DGAT2L7PQ6IED9 249 aa12.64□□□□□ -0.39
SCARF1-205ENST00000571272 COX6A2Q02221 97 aa12.63□□□□□ -0.39
SCARF1-205ENST00000571272 TMEM101Q96IK0 257 aa12.63□□□□□ -0.39
SCARF1-205ENST00000571272 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
SCARF1-205ENST00000571272 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
SCARF1-205ENST00000571272 KHDC1LQ5JSQ8 128 aa12.62□□□□□ -0.39
SCARF1-205ENST00000571272 IGHV3-53P01767 116 aa12.62□□□□□ -0.39
SCARF1-205ENST00000571272 C11orf72Q8NBR9 251 aa12.62□□□□□ -0.39
SCARF1-205ENST00000571272 PTPN13Q12923 2485 aa12.62□□□□□ -0.39
SCARF1-205ENST00000571272 YAE1D1Q9NRH1 226 aa12.61□□□□□ -0.39
SCARF1-205ENST00000571272 IGHV3OR16-12A0A075B7B8 117 aa12.6□□□□□ -0.39
SCARF1-205ENST00000571272 LST1O00453 97 aa12.6□□□□□ -0.39
SCARF1-205ENST00000571272 NDUFA7O95182 113 aa12.6□□□□□ -0.39
SCARF1-205ENST00000571272 LINC01600Q96MT4 127 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms