RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 C15orf53Q8NAA6 179 aa10.71□□□□□ -0.69
HERPUD1-219ENST00000570273 HSBP1O75506 76 aa10.7□□□□□ -0.7
HERPUD1-219ENST00000570273 ORMDL2Q53FV1 153 aa10.7□□□□□ -0.7
HERPUD1-219ENST00000570273 LINC01546A6NGU7 62 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 K7EMI3 77 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 NUPR1O60356 82 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 AMTP48728 403 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 GTSF1LQ9H1H1 148 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 DNAH7Q8WXX0 4024 aa10.69□□□□□ -0.7
HERPUD1-219ENST00000570273 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
HERPUD1-219ENST00000570273 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
HERPUD1-219ENST00000570273 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 PDZD11Q5EBL8 140 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 WWC2-AS2Q96NR7 200 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 TRBV6-8A0A0A6YYG3 113 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 ESDP10768 282 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 SNRPEP62304 92 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 ZFAND6Q6FIF0 208 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 FAM19A2Q8N3H0 131 aa10.67□□□□□ -0.7
HERPUD1-219ENST00000570273 HBDP02042 147 aa10.66□□□□□ -0.7
HERPUD1-219ENST00000570273 MUC7Q8TAX7 377 aa10.66□□□□□ -0.7
HERPUD1-219ENST00000570273 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
HERPUD1-219ENST00000570273 CHCHD7Q9BUK0 85 aa10.66□□□□□ -0.7
HERPUD1-219ENST00000570273 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-219ENST00000570273 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-219ENST00000570273 TIRAPP58753 221 aa10.65□□□□□ -0.7
HERPUD1-219ENST00000570273 CYSLTR1Q9Y271 337 aa10.65□□□□□ -0.7
HERPUD1-219ENST00000570273 C5orf52A6NGY3 159 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 LELP1Q5T871 98 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 HIST3H2BBQ8N257 126 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
HERPUD1-219ENST00000570273 A0A096LNJ9 63 aa10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 UBE2L6O14933 153 aa10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 G0S2P27469 103 aa10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 S100A2P29034 98 aa10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 TMEM18Q96B42 140 aa10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
HERPUD1-219ENST00000570273 GAGE6Q13070 117 aa10.62□□□□□ -0.71
HERPUD1-219ENST00000570273 ESRGQ1W209 222 aa10.62□□□□□ -0.71
HERPUD1-219ENST00000570273 TOMM6Q96B49 74 aa10.61□□□□□ -0.71
HERPUD1-219ENST00000570273 CSMD3Q7Z407 3707 aa10.61□□□□□ -0.71
HERPUD1-219ENST00000570273 TRAV8-6A0A0B4J262 113 aa10.6□□□□□ -0.71
HERPUD1-219ENST00000570273 TCTAP57738 103 aa10.6□□□□□ -0.71
HERPUD1-219ENST00000570273 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
HERPUD1-219ENST00000570273 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
HERPUD1-219ENST00000570273 FABP4P15090 132 aa10.59□□□□□ -0.71
HERPUD1-219ENST00000570273 CCL18P55774 89 aa10.59□□□□□ -0.71
HERPUD1-219ENST00000570273 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
HERPUD1-219ENST00000570273 SCGB3A1Q96QR1 104 aa10.59□□□□□ -0.71
HERPUD1-219ENST00000570273 H7C423 109 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 FGF6P10767 208 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 SMAGPQ0VAQ4 97 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 HIST1H2BLQ99880 126 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 PKIAP61925 76 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 LINC00173Q6ZV60 143 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 HSPB8Q9UJY1 196 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 LINC00588Q9Y4M8 146 aa10.58□□□□□ -0.72
HERPUD1-219ENST00000570273 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 IFITM10A6NMD0 228 aa10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 ATP5LO75964 103 aa10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 MRPL52Q86TS9 123 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 WFDC10BQ8IUB3 73 aa10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 UBE2DNLQ8IWF7 75 aa10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 PACRGQ96M98 296 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 TIMM21Q9BVV7 248 aa10.57□□□□□ -0.72
HERPUD1-219ENST00000570273 ERASQ7Z444 233 aa10.56□□□□□ -0.72
HERPUD1-219ENST00000570273 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
HERPUD1-219ENST00000570273 TMEM101Q96IK0 257 aa10.56□□□□□ -0.72
HERPUD1-219ENST00000570273 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
HERPUD1-219ENST00000570273 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
HERPUD1-219ENST00000570273 A0A087WX48 190 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 C3orf84H3BNL1 204 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 ZNF25P17030 456 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 Q6ZUT4 128 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 TMEM141Q96I45 108 aa10.55□□□□□ -0.72
HERPUD1-219ENST00000570273 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
HERPUD1-219ENST00000570273 RBX1P62877 108 aa10.54□□□□□ -0.72
HERPUD1-219ENST00000570273 OPRPNQ99935 248 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-219ENST00000570273 STARD9Q9P2P6 4700 aa10.53□□□□□ -0.72
HERPUD1-219ENST00000570273 Q6ZN92 141 aa10.53□□□□□ -0.72
HERPUD1-219ENST00000570273 Q8N3U1 123 aa10.53□□□□□ -0.72
HERPUD1-219ENST00000570273 Q8N976 141 aa10.53□□□□□ -0.72
HERPUD1-219ENST00000570273 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 235.4 ms