RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 SLURP1P55000 103 aa13.4□□□□□ -0.26
PKD1-235ENST00000568591 SS18L2Q9UHA2 77 aa13.4□□□□□ -0.26
PKD1-235ENST00000568591 ZNF469Q96JG9 3925 aaPredicted RBP13.4□□□□□ -0.26
PKD1-235ENST00000568591 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
PKD1-235ENST00000568591 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
PKD1-235ENST00000568591 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
PKD1-235ENST00000568591 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
PKD1-235ENST00000568591 A0A0J9YXY3 114 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 NACAE9PAV3 2078 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 DEFB131AP59861 70 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 TEX15Q9BXT5 2789 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 PTPN13Q12923 2485 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
PKD1-235ENST00000568591 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 A8MWV9 139 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 C9JAW5 83 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 PPDPFLQ8WWR9 84 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
PKD1-235ENST00000568591 TLN2Q9Y4G6 2542 aa13.39□□□□□ -0.27
PKD1-235ENST00000568591 TRBV20-1A0A075B6N2 111 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 NPC2P61916 151 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 LYRM7Q5U5X0 104 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 Q6ZSV7 163 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 SBSPONQ8IVN8 264 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 TNFRSF18Q9Y5U5 241 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 ADAMTSL4-AS1Q5T5F5 129 aa13.38□□□□□ -0.27
PKD1-235ENST00000568591 IGHV3-38A0A0C4DH36 116 aa13.37□□□□□ -0.27
PKD1-235ENST00000568591 SPINK8P0C7L1 97 aa13.37□□□□□ -0.27
PKD1-235ENST00000568591 TRGV11A0A075B6L2 103 aa13.37□□□□□ -0.27
PKD1-235ENST00000568591 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.37□□□□□ -0.27
PKD1-235ENST00000568591 IGKV2-29A2NJV5 120 aaPredicted RBP13.37□□□□□ -0.27
PKD1-235ENST00000568591 Q6ZUT4 128 aa13.37□□□□□ -0.27
PKD1-235ENST00000568591 LITAFQ99732 161 aa13.37□□□□□ -0.27
PKD1-235ENST00000568591 M0R2P5 195 aa13.36□□□□□ -0.27
PKD1-235ENST00000568591 ERG28Q9UKR5 140 aa13.36□□□□□ -0.27
PKD1-235ENST00000568591 SLC25A20O43772 301 aa13.36□□□□□ -0.27
PKD1-235ENST00000568591 Q1RN00 199 aa13.36□□□□□ -0.27
PKD1-235ENST00000568591 TIMM21Q9BVV7 248 aa13.36□□□□□ -0.27
PKD1-235ENST00000568591 ZNF702PQ9H963 129 aa13.36□□□□□ -0.27
PKD1-235ENST00000568591 PRSS2P07478 247 aa13.35□□□□□ -0.27
PKD1-235ENST00000568591 NOTCH3Q9UM47 2321 aa13.34□□□□□ -0.27
PKD1-235ENST00000568591 CHD6Q8TD26 2715 aa13.34□□□□□ -0.27
PKD1-235ENST00000568591 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
PKD1-235ENST00000568591 LINC01356Q8N9X3 169 aa13.34□□□□□ -0.27
PKD1-235ENST00000568591 EPG5Q9HCE0 2579 aa13.33□□□□□ -0.27
PKD1-235ENST00000568591 A0A096LNT2 108 aa13.33□□□□□ -0.28
PKD1-235ENST00000568591 A0A0B4J2C4 111 aa13.33□□□□□ -0.28
PKD1-235ENST00000568591 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.28
PKD1-235ENST00000568591 CITED1Q99966 193 aa13.33□□□□□ -0.28
PKD1-235ENST00000568591 H3BMM0 161 aa13.33□□□□□ -0.28
PKD1-235ENST00000568591 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.28
PKD1-235ENST00000568591 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
PKD1-235ENST00000568591 C2CD3Q4AC94 2353 aa13.32□□□□□ -0.28
PKD1-235ENST00000568591 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
PKD1-235ENST00000568591 LINC00467Q9BRT7 94 aa13.32□□□□□ -0.28
PKD1-235ENST00000568591 TRIAP1O43715 76 aa13.32□□□□□ -0.28
PKD1-235ENST00000568591 UBE2E2Q96LR5 201 aa13.32□□□□□ -0.28
PKD1-235ENST00000568591 DAND5Q8N907 189 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 PYGO1Q9Y3Y4 419 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 NF1P21359 2839 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 TMEM89A2RUT3 159 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 GATA3P23771 443 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 NDUFA12Q9UI09 145 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 UBE2D4Q9Y2X8 147 aa13.31□□□□□ -0.28
PKD1-235ENST00000568591 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
PKD1-235ENST00000568591 WNK1Q9H4A3 2382 aa13.3□□□□□ -0.28
PKD1-235ENST00000568591 NAV2Q8IVL1 2488 aa13.3□□□□□ -0.28
PKD1-235ENST00000568591 RNF152Q8N8N0 203 aa13.3□□□□□ -0.28
PKD1-235ENST00000568591 IGHV1-58A0A0C4DH39 117 aa13.29□□□□□ -0.28
PKD1-235ENST00000568591 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
PKD1-235ENST00000568591 NTN5Q8WTR8 489 aaPredicted RBP13.29□□□□□ -0.28
PKD1-235ENST00000568591 ZNF462Q96JM2 2506 aa13.29□□□□□ -0.28
PKD1-235ENST00000568591 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
PKD1-235ENST00000568591 VSIG2Q96IQ7 327 aa13.28□□□□□ -0.28
PKD1-235ENST00000568591 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.27□□□□□ -0.29
PKD1-235ENST00000568591 TEX49A0A1B0GTD5 131 aa13.27□□□□□ -0.29
PKD1-235ENST00000568591 LINC01620Q4KN68 170 aa13.27□□□□□ -0.29
PKD1-235ENST00000568591 KHDC1LQ5JSQ8 128 aa13.27□□□□□ -0.29
PKD1-235ENST00000568591 Q6YL49 198 aa13.27□□□□□ -0.29
PKD1-235ENST00000568591 LINC01587Q99440 93 aa13.27□□□□□ -0.29
PKD1-235ENST00000568591 YAE1D1Q9NRH1 226 aa13.27□□□□□ -0.29
PKD1-235ENST00000568591 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
PKD1-235ENST00000568591 EDA2RQ9HAV5 297 aa13.26□□□□□ -0.29
PKD1-235ENST00000568591 CDKN2A-AS1Q9UH64 79 aa13.26□□□□□ -0.29
PKD1-235ENST00000568591 SMIM20Q8N5G0 67 aa13.25□□□□□ -0.29
PKD1-235ENST00000568591 MAP6D1Q9H9H5 199 aa13.25□□□□□ -0.29
PKD1-235ENST00000568591 JMJD1CQ15652 2540 aa13.25□□□□□ -0.29
PKD1-235ENST00000568591 GAGE5Q13069 117 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 GAGE6Q13070 117 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 TINCRA0A1B0GVN0 87 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 NDUFA7O95182 113 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 ATXN8Q156A1 80 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 CLEC2BQ92478 149 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 NBPF19A0A087WUL8 3843 aa13.24□□□□□ -0.29
PKD1-235ENST00000568591 COX6A2Q02221 97 aa13.23□□□□□ -0.29
PKD1-235ENST00000568591 IGHV3OR16-12A0A075B7B8 117 aa13.23□□□□□ -0.29
PKD1-235ENST00000568591 A0A0U1RRA0 63 aa13.22□□□□□ -0.29
PKD1-235ENST00000568591 A8MTW9 85 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms