RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 IGHV3-30-5P0DP03 117 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 RPS10P46783 165 aaKnown RBP8.27□□□□□ -1.09
SF3B3-208ENST00000567250 AMTP48728 403 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
SF3B3-208ENST00000567250 LAGE3Q14657 143 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 ELOBQ15370 118 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 TMEM243Q9BU79 118 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 KRTAP1-5Q9BYS1 174 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 EREGO14944 169 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 TCAPO15273 167 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 MT-ND6P03923 174 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 PMCHP20382 165 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 NTM-AS1Q6ZSK4 140 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 NRACQ8N912 160 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 C20orf78Q9BR46 151 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 LAMTOR2Q9Y2Q5 125 aa8.26□□□□□ -1.09
SF3B3-208ENST00000567250 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
SF3B3-208ENST00000567250 TMEM262E9PQX1 116 aa8.25□□□□□ -1.09
SF3B3-208ENST00000567250 TNFRSF6BO95407 300 aa8.25□□□□□ -1.09
SF3B3-208ENST00000567250 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
SF3B3-208ENST00000567250 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 IBA57-AS1B1ANH7 110 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 VCYO14598 125 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 GAS8-AS1O95177 125 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 GHRHP01286 108 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 CRPP02741 224 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-208ENST00000567250 FCER1GP30273 86 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 POLR2KP53803 58 aaKnown RBP8.24□□□□□ -1.09
SF3B3-208ENST00000567250 TMEM136Q6ZRR5 245 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 PRELID3AQ96N28 172 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 GNB1LQ9BYB4 327 aa8.24□□□□□ -1.09
SF3B3-208ENST00000567250 TRAV8-3A0A0A6YYJ7 113 aa8.23□□□□□ -1.09
SF3B3-208ENST00000567250 H7C423 109 aa8.23□□□□□ -1.09
SF3B3-208ENST00000567250 NPYP01303 97 aa8.23□□□□□ -1.09
SF3B3-208ENST00000567250 MPV17L2Q567V2 206 aa8.23□□□□□ -1.09
SF3B3-208ENST00000567250 SMIM2Q9BVW6 85 aa8.23□□□□□ -1.09
SF3B3-208ENST00000567250 RTL8CO15255 209 aa8.22□□□□□ -1.09
SF3B3-208ENST00000567250 ANGP03950 147 aaKnown RBP8.22□□□□□ -1.09
SF3B3-208ENST00000567250 SMAGPQ0VAQ4 97 aa8.22□□□□□ -1.09
SF3B3-208ENST00000567250 GAGE6Q13070 117 aa8.22□□□□□ -1.09
SF3B3-208ENST00000567250 RMI2Q96E14 147 aa8.22□□□□□ -1.09
SF3B3-208ENST00000567250 MAP1LC3AQ9H492 121 aa8.22□□□□□ -1.09
SF3B3-208ENST00000567250 A0A1B0GUV1 79 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 TSHBP01222 138 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-208ENST00000567250 Q0VG73 95 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 AMMECR1LQ6DCA0 310 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 ATRAIDQ6UW56 229 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 Q8N3U1 123 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 TMEM18Q96B42 140 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 Q9HAA7 133 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 KLK12Q9UKR0 248 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 COX11Q9Y6N1 276 aa8.21□□□□□ -1.1
SF3B3-208ENST00000567250 PSCAO43653 123 aa8.2□□□□□ -1.1
SF3B3-208ENST00000567250 RBX1P62877 108 aa8.2□□□□□ -1.1
SF3B3-208ENST00000567250 Q8N976 141 aa8.2□□□□□ -1.1
SF3B3-208ENST00000567250 TM2D2Q9BX73 214 aa8.2□□□□□ -1.1
SF3B3-208ENST00000567250 SMCO4Q9NRQ5 59 aa8.2□□□□□ -1.1
SF3B3-208ENST00000567250 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-208ENST00000567250 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
SF3B3-208ENST00000567250 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-208ENST00000567250 RAB5AP20339 215 aa8.19□□□□□ -1.1
SF3B3-208ENST00000567250 RNASEKQ6P5S7 137 aaKnown RBP8.19□□□□□ -1.1
SF3B3-208ENST00000567250 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
SF3B3-208ENST00000567250 TMEM101Q96IK0 257 aa8.19□□□□□ -1.1
SF3B3-208ENST00000567250 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
SF3B3-208ENST00000567250 PRSS47A8MTI9 375 aa8.18□□□□□ -1.1
SF3B3-208ENST00000567250 K7EMI3 77 aa8.18□□□□□ -1.1
SF3B3-208ENST00000567250 FGF6P10767 208 aa8.18□□□□□ -1.1
SF3B3-208ENST00000567250 ESDP10768 282 aa8.18□□□□□ -1.1
SF3B3-208ENST00000567250 MIAQ16674 131 aa8.18□□□□□ -1.1
SF3B3-208ENST00000567250 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-208ENST00000567250 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
SF3B3-208ENST00000567250 FABP9Q0Z7S8 132 aa8.17□□□□□ -1.1
SF3B3-208ENST00000567250 CBLN2Q8IUK8 224 aa8.17□□□□□ -1.1
SF3B3-208ENST00000567250 C1orf43Q9BWL3 253 aa8.17□□□□□ -1.1
SF3B3-208ENST00000567250 PRR34Q9NV39 138 aa8.17□□□□□ -1.1
SF3B3-208ENST00000567250 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
SF3B3-208ENST00000567250 IGKV2D-24A0A075B6R9 120 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 LOC389332A0A1B0GUA5 103 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 REG3AQ06141 175 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 KIAA1644Q3SXP7 199 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 DGAT2L7PQ6IED9 249 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
SF3B3-208ENST00000567250 LINC00269Q8N2A0 174 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 Q8N8P6 123 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 C20orf203Q8NBC4 194 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
SF3B3-208ENST00000567250 IGLV4-60A0A075B6I1 120 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms