RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SFT2D1Q8WV19 159 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 LINC00526Q96FQ7 95 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 DPH3Q96FX2 82 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 MARVELD1Q9BSK0 173 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ZNF471Q9BX82 626 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 MRPL32Q9BYC8 188 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 WDR61Q9GZS3 305 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A31Q9H0C2 315 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 C11orf68Q9H3H3 251 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 TMEM231Q9H6L2 316 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 TREM1Q9NP99 234 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 LYRM2Q9NU23 88 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 UQCC1Q9NVA1 299 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ZNF492Q9P255 531 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 PSG8Q9UQ74 426 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 FUT9Q9Y231 359 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 IGLV10-54A0A075B6I4 117 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 FXYD6-FXYD2A0A087WZ82 144 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TRAV26-2A0A0B4J265 109 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 IGKV3OR2-268A0A0C4DH90 116 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 DUXBA0A1W2PPF3 345 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 A0A1W2PPV4 95 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TMEM189A5PLL7 270 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 NAP1L6A6NFF2 107 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 LYRM9A8MSI8 78 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 A8MUU9 505 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 GGTLC3B5MD39 225 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 KRBOX1C9JBD0 128 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TMEM262E9PQX1 116 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 H3BVH4 76 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 M0R381 172 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 SIVA1O15304 175 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ARPC5O15511 151 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 SCGB2A1O75556 95 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 CFDP00746 253 aaPredicted RBP0.65□□□□□ -2.31
SMG1-212ENST00000566328 IFNA7P01567 189 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 IFNA5P01569 189 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ORM1P02763 201 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TCRAP04437 139 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TYMSP04818 313 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 FABP1P07148 127 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 CRYGDP07320 174 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ARMS2P0C7Q2 107 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 INAFM2P0DMQ5 153 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 PVALBP20472 110 aaPredicted RBP0.65□□□□□ -2.31
SMG1-212ENST00000566328 GCHFRP30047 84 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TSPOP30536 169 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 LEPP41159 167 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 CSN1S1P47710 185 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 NKX2-5P52952 324 aaPredicted RBP0.65□□□□□ -2.31
SMG1-212ENST00000566328 TAS2R30P59541 319 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 FLI1Q01543 452 aaPredicted RBP0.65□□□□□ -2.31
SMG1-212ENST00000566328 RAB31Q13636 194 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 OXA1LQ15070 435 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ATP6V1FQ16864 119 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 OR10J3Q5JRS4 329 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 SOHLH1Q5JUK2 328 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 FAM74A1Q5RGS3 127 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TMEM78Q5T7P6 136 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 FAM74A4Q5TZK3 123 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 Q5VSD8 79 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 CFAP126Q5VTH2 177 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 CLPSL2Q6UWE3 100 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ENHOQ6UWT2 76 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ZNF493Q6ZR52 646 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 NTM-AS1Q6ZSK4 140 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 STX12Q86Y82 276 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 LINC00269Q8N2A0 174 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 EIF4E3Q8N5X7 224 aaKnown RBP0.65□□□□□ -2.31
SMG1-212ENST00000566328 OR2G3Q8NGZ4 309 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 LYPD6BQ8NI32 183 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 CMTM2Q8TAZ6 248 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TMEM263Q8WUH6 116 aaKnown RBP0.65□□□□□ -2.31
SMG1-212ENST00000566328 ASB13Q8WXK3 278 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ZC2HC1AQ96GY0 325 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 GPR82Q96P67 336 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 ATP5SQ99766 215 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 DERL1Q9BUN8 251 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 GGACTQ9BVM4 153 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 MED28Q9H204 178 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 TMEM14CQ9P0S9 112 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 PRO0255Q9UI72 69 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 EPDR1Q9UM22 224 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 HSPB11Q9Y547 144 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
SMG1-212ENST00000566328 MUC17Q685J3 4493 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 TRAV4A0A0B4J268 109 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 TRAV21A0A0B4J279 112 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 A0A0J9YXV3 536 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 SERTM2A0A1B0GWG4 89 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 FAM74A7A6NL05 159 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 FABP5P3A8MUU1 101 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 IBA57-AS1B1ANH7 110 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 B4DEV8 164 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 C9JQL5 133 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 FNDC10F2Z333 226 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 C17orf112F2Z3M2 114 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 SMKR1H3BMG3 65 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 M0R2P5 195 aa0.64□□□□□ -2.31
SMG1-212ENST00000566328 PEX7O00628 323 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms