RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ZNF625Q96I27 306 aaPredicted RBP15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 FAM19A4Q96LR4 140 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 YAE1D1Q9NRH1 226 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 FAM223BA6NKX1 122 aa15.17■□□□□ 0.02
MAP1LC3B-206ENST00000564844 FAM223AQ8IWN6 122 aa15.17■□□□□ 0.02
MAP1LC3B-206ENST00000564844 CD28P10747 220 aa15.17■□□□□ 0.02
MAP1LC3B-206ENST00000564844 ODF3Q96PU9 254 aa15.16■□□□□ 0.02
MAP1LC3B-206ENST00000564844 NIPBLQ6KC79 2804 aaeCLIP15.16■□□□□ 0.028e-7■■■□□ 15.3
MAP1LC3B-206ENST00000564844 IGLV4-3A0A075B6K6 122 aa15.16■□□□□ 0.02
MAP1LC3B-206ENST00000564844 IFITM1P13164 125 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 IGHV3-38A0A0C4DH36 116 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 C20orf203Q8NBC4 194 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 TIMM21Q9BVV7 248 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 NF1P21359 2839 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 KLLNB2CW77 178 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 MAPK1IP1LQ8NDC0 245 aa15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 DAZ1Q9NQZ3 744 aaKnown RBP15.15■□□□□ 0.02
MAP1LC3B-206ENST00000564844 H3BMM0 161 aa15.14■□□□□ 0.01
MAP1LC3B-206ENST00000564844 UBE2WQ96B02 151 aa15.14■□□□□ 0.01
MAP1LC3B-206ENST00000564844 MXRA5Q9NR99 2828 aa15.14■□□□□ 0.01
MAP1LC3B-206ENST00000564844 IGHV3-16A0A0C4DH30 117 aa15.14■□□□□ 0.01
MAP1LC3B-206ENST00000564844 GAGE12JA6NER3 117 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 GAGE7O76087 117 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 GAGE12FP0CL80 117 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 GAGE12GP0CL81 117 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 GAGE12IP0CL82 117 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 GAGE4Q13068 117 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 C19orf84I3L1E1 186 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 MED14OSP0DP75 135 aa15.13■□□□□ 0.01
MAP1LC3B-206ENST00000564844 H7C423 109 aa15.12■□□□□ 0.01
MAP1LC3B-206ENST00000564844 LGALS9O00182 355 aa15.12■□□□□ 0.01
MAP1LC3B-206ENST00000564844 CHCHD5Q9BSY4 110 aa15.12■□□□□ 0.01
MAP1LC3B-206ENST00000564844 NDUFA12Q9UI09 145 aa15.12■□□□□ 0.01
MAP1LC3B-206ENST00000564844 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 IGKV2-29A2NJV5 120 aaPredicted RBP15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 NXPH4O95158 308 aa15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 ICOSQ9Y6W8 199 aa15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 CHD6Q8TD26 2715 aa15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 A0A0B4J2C4 111 aa15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 M0R2P5 195 aa15.11■□□□□ 0.01
MAP1LC3B-206ENST00000564844 ANKRD17O75179 2603 aaKnown RBP15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 I3L3M4 83 aa15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 FBXL19-AS1Q494R0 122 aa15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 DCANP1Q8TF63 244 aa15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 NRGNQ92686 78 aa15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 TRBV10-2A0A0K0K1G8 114 aa15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 POM121L12Q8N7R1 296 aa15.1■□□□□ 0.01
MAP1LC3B-206ENST00000564844 IGHV4-61A0A0C4DH41 118 aa15.08■□□□□ 0.01
MAP1LC3B-206ENST00000564844 APRG1Q8IVJ8 170 aa15.08■□□□□ 0
MAP1LC3B-206ENST00000564844 C19orf54Q5BKX5 351 aa15.08■□□□□ 0
MAP1LC3B-206ENST00000564844 IGHV1-69P01742 117 aa15.07■□□□□ 0
MAP1LC3B-206ENST00000564844 FN1P02751 2386 aaKnown RBP15.07■□□□□ 0
MAP1LC3B-206ENST00000564844 MTORP42345 2549 aa15.07■□□□□ 0
MAP1LC3B-206ENST00000564844 IGHV1OR15-1A0A075B7D0 117 aa15.07■□□□□ 0
MAP1LC3B-206ENST00000564844 RPL13AP40429 203 aaKnown RBP15.06■□□□□ 0
MAP1LC3B-206ENST00000564844 KLRB1Q12918 225 aa15.06■□□□□ 0
MAP1LC3B-206ENST00000564844 LITAFQ99732 161 aa15.06■□□□□ 0
MAP1LC3B-206ENST00000564844 M0QXV9 152 aa15.06■□□□□ 0
MAP1LC3B-206ENST00000564844 KLK9Q2XQG4 91 aa15.06■□□□□ 0
MAP1LC3B-206ENST00000564844 TRBV6-5A0A0K0K1A5 114 aa15.05■□□□□ 0
MAP1LC3B-206ENST00000564844 NSUN5P1Q3KNT7 163 aa15.05■□□□□ 0
MAP1LC3B-206ENST00000564844 MEIG1Q5JSS6 88 aa15.05■□□□□ 0
MAP1LC3B-206ENST00000564844 C9orf85Q96MD7 179 aa15.05■□□□□ 0
MAP1LC3B-206ENST00000564844 TEX15Q9BXT5 2789 aa15.05■□□□□ -0
MAP1LC3B-206ENST00000564844 SYNJ2BPP57105 145 aa15.05■□□□□ -0
MAP1LC3B-206ENST00000564844 COX6CP09669 75 aa15.03■□□□□ -0
MAP1LC3B-206ENST00000564844 Q6ZSN1 163 aa15.03■□□□□ -0
MAP1LC3B-206ENST00000564844 USMG5Q96IX5 58 aa15.03■□□□□ -0
MAP1LC3B-206ENST00000564844 TRBV30A0A0K0K1B3 111 aa15.03■□□□□ -0
MAP1LC3B-206ENST00000564844 RHOHQ15669 191 aa15.03■□□□□ -0
MAP1LC3B-206ENST00000564844 FAM104AQ969W3 186 aa15.03■□□□□ -0
MAP1LC3B-206ENST00000564844 A0A0J9YX75 114 aa15.02□□□□□ -0.01
MAP1LC3B-206ENST00000564844 IGHG2P01859 326 aa15.02□□□□□ -0.01
MAP1LC3B-206ENST00000564844 TRGV11A0A075B6L2 103 aa15.01□□□□□ -0.01
MAP1LC3B-206ENST00000564844 RBMY1A1P0DJD3 496 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-206ENST00000564844 RBMY1CP0DJD4 496 aa15.01□□□□□ -0.01
MAP1LC3B-206ENST00000564844 RBMY1FQ15415 496 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-206ENST00000564844 SNRPD3P62318 126 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-206ENST00000564844 CDKN2A-AS1Q9UH64 79 aa15□□□□□ -0.01
MAP1LC3B-206ENST00000564844 IGHV1-58A0A0C4DH39 117 aa15□□□□□ -0.01
MAP1LC3B-206ENST00000564844 NDUFA7O95182 113 aa15□□□□□ -0.01
MAP1LC3B-206ENST00000564844 GNLYP22749 145 aa15□□□□□ -0.01
MAP1LC3B-206ENST00000564844 DEFB136Q30KP8 78 aa14.98□□□□□ -0.01
MAP1LC3B-206ENST00000564844 KHDC1LQ5JSQ8 128 aa14.98□□□□□ -0.01
MAP1LC3B-206ENST00000564844 VSIG2Q96IQ7 327 aa14.98□□□□□ -0.01
MAP1LC3B-206ENST00000564844 MIAQ16674 131 aa14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 LINC00467Q9BRT7 94 aa14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 PPDPFQ9H3Y8 114 aa14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 RS1O15537 224 aa14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 AVPP01185 164 aa14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 ACANP16112 2415 aa14.97□□□□□ -0.01
MAP1LC3B-206ENST00000564844 ZNF462Q96JM2 2506 aa14.96□□□□□ -0.01
MAP1LC3B-206ENST00000564844 IGHV4-30-2A0A087WSY4 118 aa14.96□□□□□ -0.01
MAP1LC3B-206ENST00000564844 TMEM61Q8N0U2 210 aa14.96□□□□□ -0.01
MAP1LC3B-206ENST00000564844 MRPS36P82909 103 aaKnown RBP14.96□□□□□ -0.02
MAP1LC3B-206ENST00000564844 IGHV3OR16-12A0A075B7B8 117 aa14.95□□□□□ -0.02
MAP1LC3B-206ENST00000564844 IGHV4-59P01825 116 aa14.95□□□□□ -0.02
MAP1LC3B-206ENST00000564844 FAM236AA0A1B0GUQ0 79 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms