RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 TMEM183BQ1AE95 376 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 IAH1Q2TAA2 248 aaPredicted RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 SCGB2B2Q4G0G5 96 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 KHDC3LQ587J8 217 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 NMSQ5H8A3 153 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 TMEM183AQ8IXX5 376 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 OR8I2Q8N0Y5 310 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST3H2BBQ8N257 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 OR8A1Q8NGG7 326 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 SPACA4Q8TDM5 124 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 RNASEH2CQ8TDP1 164 aaKnown RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 MBD3L1Q8WWY6 194 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BHQ93079 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 C14orf144Q96I85 54 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BNQ99877 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BMQ99879 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 C2orf88Q9BSF0 95 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 PARD6GQ9BYG4 376 aaPredicted RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 TREM1Q9NP99 234 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 NIT2Q9NQR4 276 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 CCL28Q9NRJ3 127 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 LINC00846Q9NV44 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 ANXA10Q9UJ72 324 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 KCNIP3Q9Y2W7 256 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 IGHV3-64A0A075B6Q5 118 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 IGKV1OR2-108A0A075B7D4 117 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 BORCS7-ASMTA0A0B4J1R7 106 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 IGKV1D-13A0A0B4J2D9 117 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 B4DEV8 164 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 KRASP01116 189 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 S100A9P06702 114 aaKnown RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 CXCL1P09341 107 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 OR10J4P0C629 311 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 IGKV1-13P0DP09 117 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ATP6V0CP27449 155 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 OR10J1P30954 320 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 TCL1AP56279 114 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 PIGPP57054 158 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 HERVK_113P61574 105 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 CCL20P78556 96 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H1AQ02539 215 aaPredicted RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 BAXQ07812 192 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ZNF266Q14584 549 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 SMCO1Q147U7 214 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ZFP2Q6ZN57 461 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 H2BFWTQ7Z2G1 175 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 LYZL2Q7Z4W2 148 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 MRPL52Q86TS9 123 aaKnown RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 SELENOHQ8IZQ5 122 aaKnown RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ZFP82Q8N141 532 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 TMEM75Q8N9X5 138 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 C11orf72Q8NBR9 251 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 OR2G3Q8NGZ4 309 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ISOC2Q96AB3 205 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BLQ99880 126 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ZNF2Q9BSG1 426 aaPredicted RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 PSMG3Q9BT73 122 aaPredicted RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 CHCHD7Q9BUK0 85 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 PBDC1Q9BVG4 233 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 ACTR3CQ9C0K3 210 aaPredicted RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 TMEM222Q9H0R3 208 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 LYRM2Q9NU23 88 aaPredicted RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 C14orf166Q9Y224 244 aaKnown RBP1.64□□□□□ -2.15
LRRC28-218ENST00000560236 URGCP-MRPS24S4R325 110 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 USH2AO75445 5202 aa1.64□□□□□ -2.15
LRRC28-218ENST00000560236 A0A096LNJ9 63 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 TMEM250H0YL14 139 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 H3BQ15 152 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 AGPAT2O15120 278 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 PPYP01298 95 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 IGKV1-39P01597 117 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 IGHV3-53P01767 116 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 IGKV1D-39P04432 117 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 SLC25A5P05141 298 aaKnown RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 RNASE2P10153 161 aaKnown RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 BCL2P10415 239 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 ESDP10768 282 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 DDTP30046 118 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 LEPP41159 167 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 AKR1C3P42330 323 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 UBE2D1P51668 147 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 TAS2R30P59541 319 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 S100A10P60903 97 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 SPCS3P61009 180 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 RAB4BP61018 213 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 RAB2AP61019 212 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 PKIAP61925 76 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 MT1HP80294 61 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 JOSD1Q15040 202 aaPredicted RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 ZNF726P1Q15940 193 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 BSXQ3C1V8 233 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 ASB16-AS1Q495Z4 193 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 CYP2G1PQ6ZSU1 146 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 DAZ4Q86SG3 579 aaKnown RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 NIT1Q86X76 327 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms