RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ATP5L2Q7Z4Y8 100 aa8.28□□□□□ -1.08
SMAD3-205ENST00000558428 UBE2L6O14933 153 aa8.27□□□□□ -1.09
SMAD3-205ENST00000558428 ANGP03950 147 aaKnown RBP8.27□□□□□ -1.09
SMAD3-205ENST00000558428 PMCHP20382 165 aa8.27□□□□□ -1.09
SMAD3-205ENST00000558428 MRPL51Q4U2R6 128 aaKnown RBP8.27□□□□□ -1.09
SMAD3-205ENST00000558428 Q8N976 141 aa8.27□□□□□ -1.09
SMAD3-205ENST00000558428 UBE2WQ96B02 151 aa8.27□□□□□ -1.09
SMAD3-205ENST00000558428 TMEM70Q9BUB7 260 aa8.27□□□□□ -1.09
SMAD3-205ENST00000558428 I3L3M4 83 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 EREGO14944 169 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 PPP1R17O96001 155 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 CRPP02741 224 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 APCSP02743 223 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 CKS2P33552 79 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 RBX1P62877 108 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 SPATA12Q7Z6I5 190 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 CTDSP1Q9GZU7 261 aa8.26□□□□□ -1.09
SMAD3-205ENST00000558428 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 A0A087WTM6 91 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 POLR2KP53803 58 aaKnown RBP8.25□□□□□ -1.09
SMAD3-205ENST00000558428 Q0VG73 95 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 C10orf91Q5T1B1 145 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 NRACQ8N912 160 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 RMI2Q96E14 147 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 BTF3L4Q96K17 158 aa8.25□□□□□ -1.09
SMAD3-205ENST00000558428 CARHSP1Q9Y2V2 147 aaKnown RBP8.25□□□□□ -1.09
SMAD3-205ENST00000558428 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
SMAD3-205ENST00000558428 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
SMAD3-205ENST00000558428 D6R8Y8 96 aa8.24□□□□□ -1.09
SMAD3-205ENST00000558428 SUMO2P61956 95 aaKnown RBP8.24□□□□□ -1.09
SMAD3-205ENST00000558428 ENHOQ6UWT2 76 aa8.24□□□□□ -1.09
SMAD3-205ENST00000558428 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
SMAD3-205ENST00000558428 TMEM242Q9NWH2 141 aa8.24□□□□□ -1.09
SMAD3-205ENST00000558428 IGLV4-60A0A075B6I1 120 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.23□□□□□ -1.09
SMAD3-205ENST00000558428 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 IGKV2-29A2NJV5 120 aaPredicted RBP8.23□□□□□ -1.09
SMAD3-205ENST00000558428 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 TSHBP01222 138 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 CLPSL2Q6UWE3 100 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 COX11Q9Y6N1 276 aa8.23□□□□□ -1.09
SMAD3-205ENST00000558428 C7orf77A4D0Y5 90 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 VCYO14598 125 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 TNFRSF6BO95407 300 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 PPBPP02775 128 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 C20orf203Q8NBC4 194 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 CLRN3Q8NCR9 226 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 C20orf78Q9BR46 151 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 C1orf43Q9BWL3 253 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
SMAD3-205ENST00000558428 TRBV24-1A0A075B6N3 115 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 H7C423 109 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 NPYP01303 97 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 S100PP25815 95 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 FCER1GP30273 86 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 RHEBQ15382 184 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 MIAQ16674 131 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.1
SMAD3-205ENST00000558428 TMEM136Q6ZRR5 245 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 ORMDL3Q8N138 153 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 KIR2DL4Q99706 377 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
SMAD3-205ENST00000558428 RYR1P21817 5038 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 TRAV9-1A0A075B6T8 112 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 PHOX2AO14813 284 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 APOC3P02656 99 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 FGF6P10767 208 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 ESDP10768 282 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMAD3-205ENST00000558428 REG3AQ06141 175 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 NDUFA5Q16718 116 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 MAPKAPK5-AS1Q8N8E1 139 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 PRELID3AQ96N28 172 aa8.2□□□□□ -1.1
SMAD3-205ENST00000558428 LECT2O14960 151 aa8.19□□□□□ -1.1
SMAD3-205ENST00000558428 RPL32P62910 135 aaKnown RBP8.19□□□□□ -1.1
SMAD3-205ENST00000558428 WFDC2Q14508 124 aa8.19□□□□□ -1.1
SMAD3-205ENST00000558428 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
SMAD3-205ENST00000558428 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
SMAD3-205ENST00000558428 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
SMAD3-205ENST00000558428 ZNF25P17030 456 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-205ENST00000558428 CDPF1Q6NVV7 123 aa8.18□□□□□ -1.1
SMAD3-205ENST00000558428 SVBPQ8N300 66 aa8.18□□□□□ -1.1
SMAD3-205ENST00000558428 Q8N814 137 aa8.18□□□□□ -1.1
SMAD3-205ENST00000558428 TMEM101Q96IK0 257 aa8.18□□□□□ -1.1
SMAD3-205ENST00000558428 HERC2O95714 4834 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 TCAPO15273 167 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 SNAPINO95295 136 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 HLA-DQA1P01909 254 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 LAMTOR2Q9Y2Q5 125 aa8.17□□□□□ -1.1
SMAD3-205ENST00000558428 TRAV8-4A0A0B4J246 113 aa8.16□□□□□ -1.1
SMAD3-205ENST00000558428 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
SMAD3-205ENST00000558428 APOBP04114 4563 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms