RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 IGLL5B9A064 214 aa8.65□□□□□ -1.02
TPM1-209ENST00000558072 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
TPM1-209ENST00000558072 NUDT3O95989 172 aa8.65□□□□□ -1.02
TPM1-209ENST00000558072 NDUFA6P56556 154 aa8.65□□□□□ -1.02
TPM1-209ENST00000558072 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.02
TPM1-209ENST00000558072 RNASEKQ6P5S7 137 aaKnown RBP8.65□□□□□ -1.02
TPM1-209ENST00000558072 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
TPM1-209ENST00000558072 A0A096LPF7 62 aa8.64□□□□□ -1.03
TPM1-209ENST00000558072 ESDP10768 282 aa8.64□□□□□ -1.03
TPM1-209ENST00000558072 AMTP48728 403 aa8.64□□□□□ -1.03
TPM1-209ENST00000558072 CCL18P55774 89 aa8.64□□□□□ -1.03
TPM1-209ENST00000558072 MUC7Q8TAX7 377 aa8.64□□□□□ -1.03
TPM1-209ENST00000558072 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 UBE2L6O14933 153 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 IQCJQ1A5X6 159 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 LELP1Q5T871 98 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 PACRGQ96M98 296 aaPredicted RBP8.63□□□□□ -1.03
TPM1-209ENST00000558072 TMEM243Q9BU79 118 aa8.63□□□□□ -1.03
TPM1-209ENST00000558072 C3orf84H3BNL1 204 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 SERF1AO75920 110 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 TSHBP01222 138 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 HBDP02042 147 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 NPSP0C0P6 89 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 S100A2P29034 98 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 PAPPA-AS1Q5QFB9 102 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 TGP01266 2768 aa8.62□□□□□ -1.03
TPM1-209ENST00000558072 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
TPM1-209ENST00000558072 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
TPM1-209ENST00000558072 LYPD5Q6UWN5 251 aa8.61□□□□□ -1.03
TPM1-209ENST00000558072 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
TPM1-209ENST00000558072 Q9UF83 564 aa8.61□□□□□ -1.03
TPM1-209ENST00000558072 DNAH7Q8WXX0 4024 aa8.6□□□□□ -1.03
TPM1-209ENST00000558072 ATP5LO75964 103 aa8.6□□□□□ -1.03
TPM1-209ENST00000558072 ZNF25P17030 456 aaPredicted RBP8.6□□□□□ -1.03
TPM1-209ENST00000558072 BTF3P20290 206 aaKnown RBP8.6□□□□□ -1.03
TPM1-209ENST00000558072 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
TPM1-209ENST00000558072 C20orf203Q8NBC4 194 aa8.6□□□□□ -1.03
TPM1-209ENST00000558072 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
TPM1-209ENST00000558072 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
TPM1-209ENST00000558072 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
TPM1-209ENST00000558072 DGAT2L7PQ6IED9 249 aa8.59□□□□□ -1.03
TPM1-209ENST00000558072 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
TPM1-209ENST00000558072 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
TPM1-209ENST00000558072 CHCHD5Q9BSY4 110 aa8.59□□□□□ -1.03
TPM1-209ENST00000558072 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
TPM1-209ENST00000558072 K7EP13 123 aa8.58□□□□□ -1.04
TPM1-209ENST00000558072 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
TPM1-209ENST00000558072 TMEM141Q96I45 108 aa8.58□□□□□ -1.04
TPM1-209ENST00000558072 TMA7Q9Y2S6 64 aaKnown RBP8.58□□□□□ -1.04
TPM1-209ENST00000558072 PYGO1Q9Y3Y4 419 aa8.58□□□□□ -1.04
TPM1-209ENST00000558072 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
TPM1-209ENST00000558072 STARD9Q9P2P6 4700 aa8.58□□□□□ -1.04
TPM1-209ENST00000558072 A0A087WX48 190 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.57□□□□□ -1.04
TPM1-209ENST00000558072 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 Q6ZN92 141 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 ERASQ7Z444 233 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
TPM1-209ENST00000558072 URB1-AS1Q96HZ7 61 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 SCGB3A1Q96QR1 104 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 APLNQ9ULZ1 77 aa8.57□□□□□ -1.04
TPM1-209ENST00000558072 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
TPM1-209ENST00000558072 A0A1B0GUV1 79 aa8.56□□□□□ -1.04
TPM1-209ENST00000558072 TMEM262E9PQX1 116 aa8.56□□□□□ -1.04
TPM1-209ENST00000558072 AKR1D1P51857 326 aa8.56□□□□□ -1.04
TPM1-209ENST00000558072 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
TPM1-209ENST00000558072 ESRGQ1W209 222 aa8.56□□□□□ -1.04
TPM1-209ENST00000558072 UBE2DNLQ8IWF7 75 aa8.56□□□□□ -1.04
TPM1-209ENST00000558072 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
TPM1-209ENST00000558072 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
TPM1-209ENST00000558072 OR5A1Q8NGJ0 315 aa8.55□□□□□ -1.04
TPM1-209ENST00000558072 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
TPM1-209ENST00000558072 FGF6P10767 208 aa8.54□□□□□ -1.04
TPM1-209ENST00000558072 LINC00310P59036 64 aa8.54□□□□□ -1.04
TPM1-209ENST00000558072 MRPS36P82909 103 aaKnown RBP8.54□□□□□ -1.04
TPM1-209ENST00000558072 PDZD11Q5EBL8 140 aa8.54□□□□□ -1.04
TPM1-209ENST00000558072 HIST3H2BBQ8N257 126 aa8.54□□□□□ -1.04
TPM1-209ENST00000558072 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
TPM1-209ENST00000558072 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.53□□□□□ -1.04
TPM1-209ENST00000558072 IGKV2-29A2NJV5 120 aaPredicted RBP8.53□□□□□ -1.04
TPM1-209ENST00000558072 CCL25O15444 150 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 C2orf88Q9BSF0 95 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 VCX2Q9H322 139 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
TPM1-209ENST00000558072 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
TPM1-209ENST00000558072 SIVA1O15304 175 aa8.52□□□□□ -1.05
TPM1-209ENST00000558072 NUPR1O60356 82 aa8.52□□□□□ -1.05
TPM1-209ENST00000558072 GAGE6Q13070 117 aa8.52□□□□□ -1.05
TPM1-209ENST00000558072 LINC01556Q5JQF7 62 aa8.52□□□□□ -1.05
TPM1-209ENST00000558072 A0A096LNJ9 63 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 PRSS1P07477 247 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms