RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
SNX6-206ENST00000556162 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
SNX6-206ENST00000556162 TRBV27A0A0K0K1C4 114 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 TMEM262E9PQX1 116 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 PHOX2AO14813 284 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 APCSP02743 223 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 NIT1Q86X76 327 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 A0A087WX48 190 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 MT-ND6P03923 174 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 C10orf126Q8N4M7 172 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 LAMTOR2Q9Y2Q5 125 aa9.62□□□□□ -0.87
SNX6-206ENST00000556162 LOC105371267A0A1B0GV96 52 aa9.61□□□□□ -0.87
SNX6-206ENST00000556162 NPYP01303 97 aa9.61□□□□□ -0.87
SNX6-206ENST00000556162 AMTP48728 403 aa9.61□□□□□ -0.87
SNX6-206ENST00000556162 PKIAP61925 76 aa9.61□□□□□ -0.87
SNX6-206ENST00000556162 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
SNX6-206ENST00000556162 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
SNX6-206ENST00000556162 KIR2DL4Q99706 377 aa9.6□□□□□ -0.87
SNX6-206ENST00000556162 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
SNX6-206ENST00000556162 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
SNX6-206ENST00000556162 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
SNX6-206ENST00000556162 KIAA1644Q3SXP7 199 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 CHCHD7Q9BUK0 85 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 UBE2L6O14933 153 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 TSHBP01222 138 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 FCER1GP30273 86 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 GAGE6Q13070 117 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 Q8N3U1 123 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
SNX6-206ENST00000556162 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
SNX6-206ENST00000556162 SMIM2Q9BVW6 85 aa9.58□□□□□ -0.88
SNX6-206ENST00000556162 MAP1LC3AQ9H492 121 aa9.58□□□□□ -0.88
SNX6-206ENST00000556162 TRAPPC1Q9Y5R8 145 aa9.58□□□□□ -0.88
SNX6-206ENST00000556162 BTF3P20290 206 aaKnown RBP9.57□□□□□ -0.88
SNX6-206ENST00000556162 C6orf223Q8N319 242 aa9.57□□□□□ -0.88
SNX6-206ENST00000556162 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
SNX6-206ENST00000556162 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
SNX6-206ENST00000556162 IBA57-AS1B1ANH7 110 aa9.57□□□□□ -0.88
SNX6-206ENST00000556162 TCAPO15273 167 aa9.57□□□□□ -0.88
SNX6-206ENST00000556162 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
SNX6-206ENST00000556162 H7C423 109 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 ESDP10768 282 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 RBX1P62877 108 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 Q8N976 141 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 FRAS1Q86XX4 4008 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.55□□□□□ -0.88
SNX6-206ENST00000556162 IGKV2-29A2NJV5 120 aaPredicted RBP9.55□□□□□ -0.88
SNX6-206ENST00000556162 RAB5AP20339 215 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 LAGE3Q14657 143 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 ALKBH7Q9BT30 221 aaPredicted RBP9.55□□□□□ -0.88
SNX6-206ENST00000556162 DNAH17Q9UFH2 4485 aa9.55□□□□□ -0.88
SNX6-206ENST00000556162 A0A1B0GUV1 79 aa9.54□□□□□ -0.88
SNX6-206ENST00000556162 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
SNX6-206ENST00000556162 AMMECR1LQ6DCA0 310 aa9.54□□□□□ -0.88
SNX6-206ENST00000556162 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
SNX6-206ENST00000556162 Q8N8P6 123 aa9.53□□□□□ -0.88
SNX6-206ENST00000556162 TRAV8-3A0A0A6YYJ7 113 aa9.53□□□□□ -0.88
SNX6-206ENST00000556162 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
SNX6-206ENST00000556162 TMEM18Q96B42 140 aa9.53□□□□□ -0.88
SNX6-206ENST00000556162 Q9HAA7 133 aa9.53□□□□□ -0.88
SNX6-206ENST00000556162 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
SNX6-206ENST00000556162 RTL8CO15255 209 aa9.52□□□□□ -0.89
SNX6-206ENST00000556162 FGF6P10767 208 aa9.52□□□□□ -0.89
SNX6-206ENST00000556162 UBE2WQ96B02 151 aa9.52□□□□□ -0.89
SNX6-206ENST00000556162 CRPP02741 224 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 C20orf203Q8NBC4 194 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 IGLV4-60A0A075B6I1 120 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 COLCA2A8K830 154 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 K7EMI3 77 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 ZNF25P17030 456 aaPredicted RBP9.51□□□□□ -0.89
SNX6-206ENST00000556162 IFI27P40305 119 aaPredicted RBP9.51□□□□□ -0.89
SNX6-206ENST00000556162 Q0VG73 95 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
SNX6-206ENST00000556162 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
SNX6-206ENST00000556162 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 ENHOQ6UWT2 76 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
SNX6-206ENST00000556162 OR5A1Q8NGJ0 315 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 RMI2Q96E14 147 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 PRR34Q9NV39 138 aa9.49□□□□□ -0.89
SNX6-206ENST00000556162 PSCAO43653 123 aa9.48□□□□□ -0.89
SNX6-206ENST00000556162 REG3AQ06141 175 aa9.48□□□□□ -0.89
SNX6-206ENST00000556162 MIAQ16674 131 aa9.48□□□□□ -0.89
SNX6-206ENST00000556162 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
SNX6-206ENST00000556162 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
SNX6-206ENST00000556162 PRSS29PA6NIE9 313 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms