RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
ACTN1-216ENST00000556083 LTBP2Q14767 1821 aa8.07□□□□□ -1.12
ACTN1-216ENST00000556083 TRBV6-8A0A0A6YYG3 113 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 F8WDY8 70 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 NDUFA7O95182 113 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 DHRS4-AS1Q9P1J3 65 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 P0DMU3 169 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
ACTN1-216ENST00000556083 ZFAND3Q9H8U3 227 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 CRYGDP07320 174 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 COX17Q14061 63 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 Q6ZUT4 128 aa8.06□□□□□ -1.12
ACTN1-216ENST00000556083 U3KQK5 164 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 TMEM131Q92545 1883 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 E7EUB6 86 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 NCR3O14931 201 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 CHD3Q12873 2000 aaKnown RBP8.05□□□□□ -1.12
ACTN1-216ENST00000556083 NDUFC1O43677 76 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 Q8N6K4 173 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 IGHV4-4A0A075B6R2 117 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 Q6ZSV7 163 aa8.05□□□□□ -1.12
ACTN1-216ENST00000556083 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 V9GYY9 64 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 TRBV30A0A0K0K1B3 111 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 IGLV2-8P01709 118 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 PRB1P04280 392 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 LELP1Q5T871 98 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 CD164L2Q6UWJ8 174 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 Q6ZTI0 123 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 TECTAO75443 2155 aa8.04□□□□□ -1.12
ACTN1-216ENST00000556083 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 MED13LQ71F56 2210 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 TMEM223A0PJW6 202 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 K7ERS5 55 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 PLXNB3Q9ULL4 1909 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 M0QY20 66 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 LINC00269Q8N2A0 174 aa8.03□□□□□ -1.12
ACTN1-216ENST00000556083 LINC00173Q6ZV60 143 aa8.02□□□□□ -1.12
ACTN1-216ENST00000556083 IGLV4-3A0A075B6K6 122 aa8.02□□□□□ -1.13
ACTN1-216ENST00000556083 H0Y9J4 135 aa8.02□□□□□ -1.13
ACTN1-216ENST00000556083 CFAP126Q5VTH2 177 aa8.02□□□□□ -1.13
ACTN1-216ENST00000556083 ZNF22P17026 224 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-216ENST00000556083 IGLV4-69A0A075B6H9 119 aa8.01□□□□□ -1.13
ACTN1-216ENST00000556083 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
ACTN1-216ENST00000556083 M0R378 163 aa8.01□□□□□ -1.13
ACTN1-216ENST00000556083 CRIP2P52943 208 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-216ENST00000556083 NUPR1O60356 82 aa8.01□□□□□ -1.13
ACTN1-216ENST00000556083 KLLNB2CW77 178 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 ZNF80P51504 273 aaPredicted RBP8□□□□□ -1.13
ACTN1-216ENST00000556083 IGLV1-40P01703 118 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 USP34Q70CQ2 3546 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 DENND4CQ5VZ89 1909 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 BRWD1-AS2P59051 145 aa8□□□□□ -1.13
ACTN1-216ENST00000556083 IGHV4-28A0A0C4DH34 117 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 UQCRQO14949 82 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 WFDC2Q14508 124 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 CDKN2A-AS1Q9UH64 79 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 B5MCH6 92 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 G3V4G9 280 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 LINC00467Q9BRT7 94 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 PRR15LQ9BU68 103 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 HIGD2AQ9BW72 106 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 CNFNQ9BYD5 112 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 DYSFO75923 2080 aa7.99□□□□□ -1.13
ACTN1-216ENST00000556083 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 NRGNQ92686 78 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 ZNF702PQ9H963 129 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 ZNF843Q8N446 348 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 FAM110AQ9BQ89 295 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 UTRNP46939 3433 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 ESM1Q9NQ30 184 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 PLCE1Q9P212 2302 aa7.98□□□□□ -1.13
ACTN1-216ENST00000556083 C5orf47Q569G3 176 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 Q8N976 141 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-216ENST00000556083 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 C10orf142B7Z368 130 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
ACTN1-216ENST00000556083 DAND5Q8N907 189 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 WFDC11Q8NEX6 87 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
ACTN1-216ENST00000556083 ZNF106Q9H2Y7 1883 aaKnown RBP7.96□□□□□ -1.13
ACTN1-216ENST00000556083 A0A087WZ39 114 aa7.96□□□□□ -1.14
ACTN1-216ENST00000556083 C19orf84I3L1E1 186 aa7.96□□□□□ -1.14
ACTN1-216ENST00000556083 Q8IZM0 81 aa7.96□□□□□ -1.14
ACTN1-216ENST00000556083 LINC01006Q8NI28 216 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms