RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 RAB19A4D1S5 217 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 H7C1H1 209 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 UBE2L6O14933 153 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 P01737 135 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 XCL1P47992 114 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 AMTP48728 403 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 FOXA3P55318 350 aaPredicted RBP4.13□□□□□ -1.75
PCNX4-208ENST00000554534 CCL20P78556 96 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 GAGE2BQ13066 116 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 RNASEKQ6P5S7 137 aaKnown RBP4.13□□□□□ -1.75
PCNX4-208ENST00000554534 TMUB2Q71RG4 321 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 SFT2D1Q8WV19 159 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 CHCHD10Q8WYQ3 142 aaPredicted RBP4.13□□□□□ -1.75
PCNX4-208ENST00000554534 MLST8Q9BVC4 326 aa4.13□□□□□ -1.75
PCNX4-208ENST00000554534 OR5AL1P0C617 328 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 PKIAP61925 76 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 TMEM97Q5BJF2 176 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 RASL11AQ6T310 242 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 REG3GQ6UW15 175 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 LYZL1Q6UWQ5 148 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 Q6ZNX1 250 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 OR2D3Q8NGH3 330 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 FAM213BQ8TBF2 198 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 RPL39LQ96EH5 51 aaKnown RBP4.12□□□□□ -1.75
PCNX4-208ENST00000554534 AP1S3Q96PC3 154 aa4.12□□□□□ -1.75
PCNX4-208ENST00000554534 NKX6-2Q9C056 277 aaPredicted RBP4.12□□□□□ -1.75
PCNX4-208ENST00000554534 A0A1B0GUV1 79 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 G3V3Q6 166 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 ARPC5O15511 151 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 IGLC6P0CF74 106 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 NTF3P20783 257 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 RPL35P42766 123 aaKnown RBP4.11□□□□□ -1.75
PCNX4-208ENST00000554534 FOXI1Q12951 378 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 AMMECR1LQ6DCA0 310 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 PHF5AQ7RTV0 110 aaKnown RBP4.11□□□□□ -1.75
PCNX4-208ENST00000554534 FER1L6-AS1Q8NA97 138 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 NIT2Q9NQR4 276 aa4.11□□□□□ -1.75
PCNX4-208ENST00000554534 CCL25O15444 150 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 BCL2P10415 239 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 COTL1Q14019 142 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 CFAP161Q6P656 301 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 Q6ZRP5 223 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 KCNRGQ8N5I3 272 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 OPRPNQ99935 248 aaPredicted RBP4.1□□□□□ -1.75
PCNX4-208ENST00000554534 PSORS1C2Q9UIG4 136 aa4.1□□□□□ -1.75
PCNX4-208ENST00000554534 GVQW2A0A096LPI5 108 aaPredicted RBP4.09□□□□□ -1.75
PCNX4-208ENST00000554534 PFDN1O60925 122 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 GIPP09681 153 aaPredicted RBP4.09□□□□□ -1.75
PCNX4-208ENST00000554534 FGF6P10767 208 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 TWIST1Q15672 202 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 CENPWQ5EE01 88 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
PCNX4-208ENST00000554534 C1orf137Q5JT78 98 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 LINC00299Q6ZSB3 139 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 CARD19Q96LW7 228 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 GNG13Q9P2W3 67 aa4.09□□□□□ -1.75
PCNX4-208ENST00000554534 LINC00959A0A1B0GUT2 108 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 FAM231BA6NCW3 169 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 IFNA1P01562 189 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 MT-ND6P03923 174 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 S100A9P06702 114 aaKnown RBP4.08□□□□□ -1.76
PCNX4-208ENST00000554534 CXCL1P09341 107 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 SYCNQ0VAF6 134 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 PRR4Q16378 134 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 MBD3L1Q8WWY6 194 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 PGLYRP4Q96LB8 373 aa4.08□□□□□ -1.76
PCNX4-208ENST00000554534 IGLV4-69A0A075B6H9 119 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 FAM168BA1KXE4 195 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 C19orf71A6NCJ1 209 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 H2AFB1P0C5Y9 115 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 PMCHP20382 165 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
PCNX4-208ENST00000554534 PTTG1IPP53801 180 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 CACNG7P62955 275 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
PCNX4-208ENST00000554534 NUDT10Q8NFP7 164 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 OR5A1Q8NGJ0 315 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 NUDT11Q96G61 164 aa4.07□□□□□ -1.76
PCNX4-208ENST00000554534 RNASE7Q9H1E1 156 aaKnown RBP4.07□□□□□ -1.76
PCNX4-208ENST00000554534 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 TRBV20OR9-2A0A075B6H5 130 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 IGHV1-58A0A0C4DH39 117 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 SDHAF1A6NFY7 115 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 ZNF561-AS1K7EIQ3 104 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 TSPAN13O95857 204 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 APCSP02743 223 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 TRGC1P0CF51 173 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 RPL18AQ02543 176 aaKnown RBP4.06□□□□□ -1.76
PCNX4-208ENST00000554534 C5orf38Q86SI9 138 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 TMEM242Q9NWH2 141 aa4.06□□□□□ -1.76
PCNX4-208ENST00000554534 A0A087WZ39 114 aa4.05□□□□□ -1.76
PCNX4-208ENST00000554534 LOC107984640A0A0U1RRK4 108 aa4.05□□□□□ -1.76
PCNX4-208ENST00000554534 SMKR1H3BMG3 65 aa4.05□□□□□ -1.76
PCNX4-208ENST00000554534 TSHBP01222 138 aa4.05□□□□□ -1.76
PCNX4-208ENST00000554534 CAMPP49913 170 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms