RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 PRADC1Q9BSG0 188 aa9.57□□□□□ -0.88
SPTLC2-202ENST00000554365 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 H3BNG1 76 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 GAGE1Q13065 139 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 GAGE4Q13068 117 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 GAGE5Q13069 117 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 LAMTOR2Q9Y2Q5 125 aa9.56□□□□□ -0.88
SPTLC2-202ENST00000554365 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
SPTLC2-202ENST00000554365 FUSP35637 526 aaKnown RBP eCLIP9.55□□□□□ -0.88
SPTLC2-202ENST00000554365 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
SPTLC2-202ENST00000554365 UBE2D3P61077 147 aa9.55□□□□□ -0.88
SPTLC2-202ENST00000554365 UBE2D2P62837 147 aa9.55□□□□□ -0.88
SPTLC2-202ENST00000554365 A0A096LPF7 62 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 PPP1R17O96001 155 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 SUMO2P61956 95 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 IQCJQ1A5X6 159 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 C18orf32Q8TCD1 76 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 C20orf78Q9BR46 151 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 TMEM70Q9BUB7 260 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
SPTLC2-202ENST00000554365 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
SPTLC2-202ENST00000554365 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
SPTLC2-202ENST00000554365 NEGR1Q7Z3B1 354 aa9.53□□□□□ -0.88
SPTLC2-202ENST00000554365 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
SPTLC2-202ENST00000554365 TNFRSF18Q9Y5U5 241 aa9.53□□□□□ -0.88
SPTLC2-202ENST00000554365 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 EREGO14944 169 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 SIVA1O15304 175 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BKO60814 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BJP06899 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BOP23527 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BBP33778 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BDP58876 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BCP62807 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST2H2BEQ16778 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 Q6ZRN7 208 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BHQ93079 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 URB1-AS1Q96HZ7 61 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BNQ99877 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 HIST1H2BMQ99879 126 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 ICOSQ9Y6W8 199 aa9.52□□□□□ -0.89
SPTLC2-202ENST00000554365 IGHV3-38A0A0C4DH36 116 aa9.51□□□□□ -0.89
SPTLC2-202ENST00000554365 LOC389332A0A1B0GUA5 103 aa9.51□□□□□ -0.89
SPTLC2-202ENST00000554365 C1orf196B1AJZ1 125 aa9.51□□□□□ -0.89
SPTLC2-202ENST00000554365 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
SPTLC2-202ENST00000554365 TSHBP01222 138 aa9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 LINC00310P59036 64 aa9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 Q0VG73 95 aa9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 Q8N8P6 123 aa9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 DEFB104AQ8WTQ1 72 aa9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
SPTLC2-202ENST00000554365 LINC01546A6NGU7 62 aa9.49□□□□□ -0.89
SPTLC2-202ENST00000554365 VCYO14598 125 aa9.49□□□□□ -0.89
SPTLC2-202ENST00000554365 XGP55808 180 aa9.49□□□□□ -0.89
SPTLC2-202ENST00000554365 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
SPTLC2-202ENST00000554365 I3L3M4 83 aa9.48□□□□□ -0.89
SPTLC2-202ENST00000554365 CDPF1Q6NVV7 123 aa9.48□□□□□ -0.89
SPTLC2-202ENST00000554365 FAT1Q14517 4588 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 TCAPO15273 167 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 PMCHP20382 165 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 Q5VSD8 79 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 SH2D6Q7Z4S9 175 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 NIT1Q86X76 327 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 NXT2Q9NPJ8 142 aaKnown RBP9.47□□□□□ -0.89
SPTLC2-202ENST00000554365 NUPR1O60356 82 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 TIRAPP58753 221 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 RAB5BP61020 215 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 NFE4Q86UQ8 179 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
SPTLC2-202ENST00000554365 ESDP10768 282 aa9.45□□□□□ -0.9
SPTLC2-202ENST00000554365 KRTAP10-1P60331 282 aa9.45□□□□□ -0.9
SPTLC2-202ENST00000554365 COTL1Q14019 142 aa9.45□□□□□ -0.9
SPTLC2-202ENST00000554365 COA6Q5JTJ3 125 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-202ENST00000554365 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 A0A087WTM6 91 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 TRBV6-8A0A0A6YYG3 113 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 SERF1AO75920 110 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 LINC00614P0C842 121 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 FA2HQ7L5A8 372 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 BAGE3Q86Y29 109 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
SPTLC2-202ENST00000554365 VPS13BQ7Z7G8 4022 aa9.43□□□□□ -0.9
SPTLC2-202ENST00000554365 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
SPTLC2-202ENST00000554365 A0A096LNJ9 63 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms