RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 H3BMQ9 156 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 CRIP1P50238 77 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 ZNF56Q15929 161 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 CNPY1Q3B7I2 92 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 URB1-AS1Q96HZ7 61 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 AQP10Q96PS8 301 aa4.08□□□□□ -1.76
ATXN3-224ENST00000554040 A0A1W2PPV4 95 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 H0Y9J4 135 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 M0R036 132 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 IGLV7-43P04211 117 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 RPL13AP40429 203 aaKnown RBP4.07□□□□□ -1.76
ATXN3-224ENST00000554040 SULT1A2P50226 295 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 TMBIM6P55061 237 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
ATXN3-224ENST00000554040 TRAV34A0A0B4J273 112 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 HMGB3O15347 200 aaKnown RBP4.06□□□□□ -1.76
ATXN3-224ENST00000554040 TSPAN13O95857 204 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 BTCP35070 178 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 AMTP48728 403 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 UBE2D1P51668 147 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 LINC01547P58512 204 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-224ENST00000554040 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 ARL2-SNX15V9GYD0 113 aa4.06□□□□□ -1.76
ATXN3-224ENST00000554040 TMSB15BA0A087X1C1 80 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 CENPXA8MT69 81 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 SH2D1AO60880 128 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 ARL14EPLP0DKL9 152 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 CYCSP99999 105 aaKnown RBP4.05□□□□□ -1.76
ATXN3-224ENST00000554040 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-224ENST00000554040 FAM162BQ5T6X4 162 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 COX8CQ7Z4L0 72 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 SCGB1C1Q8TD33 95 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 CHCHD10Q8WYQ3 142 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-224ENST00000554040 CARD19Q96LW7 228 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 SEC22CQ9BRL7 303 aa4.05□□□□□ -1.76
ATXN3-224ENST00000554040 CARHSP1Q9Y2V2 147 aaKnown RBP4.05□□□□□ -1.76
ATXN3-224ENST00000554040 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 STAG3L2P0CL84 134 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 STAG3L3P0CL85 134 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 RPL12P30050 165 aaKnown RBP4.04□□□□□ -1.76
ATXN3-224ENST00000554040 S100A5P33763 92 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 ZNF674Q2M3X9 581 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 TRIQKQ629K1 86 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
ATXN3-224ENST00000554040 LINC00526Q96FQ7 95 aa4.04□□□□□ -1.76
ATXN3-224ENST00000554040 SDHCQ99643 169 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-224ENST00000554040 A0A087WZ39 114 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 IGHV1-58A0A0C4DH39 117 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 LOC107984640A0A0U1RRK4 108 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 UBE2L6O14933 153 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 GCHFRP30047 84 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 EIF5AP63241 154 aaKnown RBP4.03□□□□□ -1.76
ATXN3-224ENST00000554040 SYCNQ0VAF6 134 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 OR10AG1Q8NH19 301 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 ZNF471Q9BX82 626 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-224ENST00000554040 ZFP30Q9Y2G7 519 aa4.03□□□□□ -1.76
ATXN3-224ENST00000554040 A0A1W2PRE2 83 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 M0QY20 66 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 FGF6P10767 208 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 CDC34P49427 236 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-224ENST00000554040 Q86TA4 180 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 MED28Q9H204 178 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 TMEM167BQ9NRX6 74 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 HSPB11Q9Y547 144 aa4.02□□□□□ -1.77
ATXN3-224ENST00000554040 MUC21A0A140T8X8 626 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 PEX7O00628 323 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 SNAI2O43623 268 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 SMIM17P0DL12 118 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 BCL2P10415 239 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 LRRC37A5PQ49AS3 106 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 ISOC2Q96AB3 205 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 PGLYRP4Q96LB8 373 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 SMIM3Q9BZL3 60 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 WFDC1Q9HC57 220 aa4.01□□□□□ -1.77
ATXN3-224ENST00000554040 A4D1N5 150 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4□□□□□ -1.77
ATXN3-224ENST00000554040 PLA2G10O15496 165 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 SIX6O95475 246 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 CXorf1O96002 111 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 CXCL1P09341 107 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 OR5AL1P0C617 328 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 XCL1P47992 114 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 CAMPP49913 170 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 NKX2-5P52952 324 aaPredicted RBP4□□□□□ -1.77
ATXN3-224ENST00000554040 SSTP61278 116 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 MEF2BQ02080 365 aaPredicted RBP4□□□□□ -1.77
ATXN3-224ENST00000554040 COTL1Q14019 142 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 CST9LP1Q5W188 147 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 TSKUQ8WUA8 353 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 HIST1H2BAQ96A08 127 aa4□□□□□ -1.77
ATXN3-224ENST00000554040 RPP21Q9H633 154 aaKnown RBP4□□□□□ -1.77
ATXN3-224ENST00000554040 IGLV4-69A0A075B6H9 119 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 NOL3O60936 208 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms