RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 UBE2L6O14933 153 aa13.51□□□□□ -0.25
HIF1A-206ENST00000553999 BORCS7Q96B45 105 aa13.51□□□□□ -0.25
HIF1A-206ENST00000553999 IGKV3OR2-268A0A0C4DH90 116 aa13.5□□□□□ -0.25
HIF1A-206ENST00000553999 SRSF3P84103 164 aaKnown RBP13.5□□□□□ -0.25
HIF1A-206ENST00000553999 REG3AQ06141 175 aa13.5□□□□□ -0.25
HIF1A-206ENST00000553999 MIAQ16674 131 aa13.5□□□□□ -0.25
HIF1A-206ENST00000553999 C20orf203Q8NBC4 194 aa13.5□□□□□ -0.25
HIF1A-206ENST00000553999 HIGD1CA8MV81 97 aa13.49□□□□□ -0.25
HIF1A-206ENST00000553999 C9JQL5 133 aa13.49□□□□□ -0.25
HIF1A-206ENST00000553999 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
HIF1A-206ENST00000553999 INAFM2P0DMQ5 153 aa13.48□□□□□ -0.25
HIF1A-206ENST00000553999 PRR34Q9NV39 138 aa13.48□□□□□ -0.25
HIF1A-206ENST00000553999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.47□□□□□ -0.25
HIF1A-206ENST00000553999 IGKV2-29A2NJV5 120 aaPredicted RBP13.47□□□□□ -0.25
HIF1A-206ENST00000553999 ADIRFQ15847 76 aa13.47□□□□□ -0.25
HIF1A-206ENST00000553999 CT83Q5H943 113 aa13.47□□□□□ -0.25
HIF1A-206ENST00000553999 TSKUQ8WUA8 353 aa13.47□□□□□ -0.25
HIF1A-206ENST00000553999 A0A1B0GUT8 65 aa13.45□□□□□ -0.26
HIF1A-206ENST00000553999 FAM229AH3BQW9 127 aa13.45□□□□□ -0.26
HIF1A-206ENST00000553999 PRSS1P07477 247 aa13.45□□□□□ -0.26
HIF1A-206ENST00000553999 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
HIF1A-206ENST00000553999 OSTCQ9NRP0 149 aa13.45□□□□□ -0.26
HIF1A-206ENST00000553999 V9GYV3 84 aa13.45□□□□□ -0.26
HIF1A-206ENST00000553999 SDHAF1A6NFY7 115 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 SMKR1H3BMG3 65 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 NCR2O95944 276 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 RPL23P62829 140 aaKnown RBP13.44□□□□□ -0.26
HIF1A-206ENST00000553999 TMEM241Q24JQ0 296 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 C14orf177Q52M58 125 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 RNASEKQ6P5S7 137 aaKnown RBP13.44□□□□□ -0.26
HIF1A-206ENST00000553999 TEX261Q6UWH6 196 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
HIF1A-206ENST00000553999 APCSP02743 223 aa13.43□□□□□ -0.26
HIF1A-206ENST00000553999 AMMECR1LQ6DCA0 310 aa13.43□□□□□ -0.26
HIF1A-206ENST00000553999 Q6ZSA8 131 aa13.43□□□□□ -0.26
HIF1A-206ENST00000553999 SCXQ7RTU7 201 aa13.43□□□□□ -0.26
HIF1A-206ENST00000553999 AMN1Q8IY45 258 aa13.43□□□□□ -0.26
HIF1A-206ENST00000553999 PMCHP20382 165 aa13.42□□□□□ -0.26
HIF1A-206ENST00000553999 RPS10P46783 165 aaKnown RBP13.42□□□□□ -0.26
HIF1A-206ENST00000553999 RNF185Q96GF1 192 aa13.42□□□□□ -0.26
HIF1A-206ENST00000553999 TMEM242Q9NWH2 141 aa13.42□□□□□ -0.26
HIF1A-206ENST00000553999 LINC00528Q8N1L1 170 aa13.41□□□□□ -0.26
HIF1A-206ENST00000553999 NUP35Q8NFH5 326 aa13.41□□□□□ -0.26
HIF1A-206ENST00000553999 FAT1Q14517 4588 aa13.41□□□□□ -0.26
HIF1A-206ENST00000553999 A0A1B0GUV1 79 aa13.4□□□□□ -0.26
HIF1A-206ENST00000553999 PEA15Q15121 130 aa13.4□□□□□ -0.26
HIF1A-206ENST00000553999 NAT8Q9UHE5 227 aa13.4□□□□□ -0.26
HIF1A-206ENST00000553999 hDV102S1A0JD36 115 aa13.39□□□□□ -0.27
HIF1A-206ENST00000553999 NDUFS6O75380 124 aaKnown RBP13.39□□□□□ -0.27
HIF1A-206ENST00000553999 TMEM191AQ9H0A3 160 aa13.39□□□□□ -0.27
HIF1A-206ENST00000553999 ST20Q9HBF5 79 aa13.39□□□□□ -0.27
HIF1A-206ENST00000553999 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
HIF1A-206ENST00000553999 FGF6P10767 208 aa13.38□□□□□ -0.27
HIF1A-206ENST00000553999 RAB4AP20338 218 aa13.38□□□□□ -0.27
HIF1A-206ENST00000553999 RIGQ13278 110 aa13.38□□□□□ -0.27
HIF1A-206ENST00000553999 FAM74A3Q4VXF1 159 aa13.38□□□□□ -0.27
HIF1A-206ENST00000553999 I3L3M4 83 aa13.37□□□□□ -0.27
HIF1A-206ENST00000553999 TSHBP01222 138 aa13.37□□□□□ -0.27
HIF1A-206ENST00000553999 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
HIF1A-206ENST00000553999 CAMPP49913 170 aa13.36□□□□□ -0.27
HIF1A-206ENST00000553999 NAT8BQ9UHF3 227 aa13.36□□□□□ -0.27
HIF1A-206ENST00000553999 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
HIF1A-206ENST00000553999 FAM231BA6NCW3 169 aa13.35□□□□□ -0.27
HIF1A-206ENST00000553999 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
HIF1A-206ENST00000553999 CHAC1Q9BUX1 264 aa13.35□□□□□ -0.27
HIF1A-206ENST00000553999 MRAP2Q96G30 205 aa13.34□□□□□ -0.27
HIF1A-206ENST00000553999 HIGD2BQ4VC39 106 aa13.33□□□□□ -0.28
HIF1A-206ENST00000553999 MRPL54Q6P161 138 aaKnown RBP13.33□□□□□ -0.28
HIF1A-206ENST00000553999 DNAH8Q96JB1 4490 aa13.33□□□□□ -0.28
HIF1A-206ENST00000553999 CHCHD10Q8WYQ3 142 aaPredicted RBP13.32□□□□□ -0.28
HIF1A-206ENST00000553999 BTF3L4Q96K17 158 aa13.32□□□□□ -0.28
HIF1A-206ENST00000553999 PLA2G1BP04054 148 aaKnown RBP13.31□□□□□ -0.28
HIF1A-206ENST00000553999 OR5A1Q8NGJ0 315 aa13.31□□□□□ -0.28
HIF1A-206ENST00000553999 TMEM101Q96IK0 257 aa13.31□□□□□ -0.28
HIF1A-206ENST00000553999 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.31□□□□□ -0.28
HIF1A-206ENST00000553999 SMIM27A0A1W2PRY6 76 aa13.3□□□□□ -0.28
HIF1A-206ENST00000553999 PANO1I0J062 215 aa13.3□□□□□ -0.28
HIF1A-206ENST00000553999 FCER1GP30273 86 aa13.3□□□□□ -0.28
HIF1A-206ENST00000553999 XCL1P47992 114 aa13.3□□□□□ -0.28
HIF1A-206ENST00000553999 POLR2KP53803 58 aaKnown RBP13.3□□□□□ -0.28
HIF1A-206ENST00000553999 MRPL51Q4U2R6 128 aaKnown RBP13.3□□□□□ -0.28
HIF1A-206ENST00000553999 AP5S1Q9NUS5 200 aa13.3□□□□□ -0.28
HIF1A-206ENST00000553999 RNASE13Q5GAN3 156 aaKnown RBP13.29□□□□□ -0.28
HIF1A-206ENST00000553999 DGAT2L7PQ6IED9 249 aa13.29□□□□□ -0.28
HIF1A-206ENST00000553999 C15orf56Q8N910 161 aa13.29□□□□□ -0.28
HIF1A-206ENST00000553999 NRACQ8N912 160 aa13.29□□□□□ -0.28
HIF1A-206ENST00000553999 C9orf163Q8N9P6 203 aa13.29□□□□□ -0.28
HIF1A-206ENST00000553999 CLRN3Q8NCR9 226 aa13.29□□□□□ -0.28
HIF1A-206ENST00000553999 FLG2Q5D862 2391 aaPredicted RBP13.29□□□□□ -0.28
HIF1A-206ENST00000553999 C7orf77A4D0Y5 90 aa13.28□□□□□ -0.28
HIF1A-206ENST00000553999 H7C423 109 aa13.28□□□□□ -0.28
HIF1A-206ENST00000553999 SLPIP03973 132 aa13.28□□□□□ -0.28
HIF1A-206ENST00000553999 ESDP10768 282 aa13.28□□□□□ -0.28
HIF1A-206ENST00000553999 FAM104BQ5XKR9 115 aa13.28□□□□□ -0.28
HIF1A-206ENST00000553999 CHTF8P0CG12 524 aa13.27□□□□□ -0.29
HIF1A-206ENST00000553999 SUMO2P61956 95 aaKnown RBP13.27□□□□□ -0.29
HIF1A-206ENST00000553999 VPS13BQ7Z7G8 4022 aa13.26□□□□□ -0.29
HIF1A-206ENST00000553999 TRBV27A0A0K0K1C4 114 aa13.26□□□□□ -0.29
HIF1A-206ENST00000553999 CCL25O15444 150 aa13.26□□□□□ -0.29
HIF1A-206ENST00000553999 ZNF25P17030 456 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms