RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 PPBPP02775 128 aa10.95□□□□□ -0.66
CHMP1A-209ENST00000550872 PKIAP61925 76 aa10.95□□□□□ -0.66
CHMP1A-209ENST00000550872 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
CHMP1A-209ENST00000550872 CHCHD7Q9BUK0 85 aa10.95□□□□□ -0.66
CHMP1A-209ENST00000550872 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 VCYO14598 125 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 ATRAIDQ6UW56 229 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 NFE4Q86UQ8 179 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 KLK12Q9UKR0 248 aa10.94□□□□□ -0.66
CHMP1A-209ENST00000550872 TRBV24-1A0A075B6N3 115 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 APCSP02743 223 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 ELOBQ15370 118 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 MPV17L2Q567V2 206 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 ORMDL3Q8N138 153 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 PRELID3AQ96N28 172 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 Q9HAA7 133 aa10.93□□□□□ -0.66
CHMP1A-209ENST00000550872 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
CHMP1A-209ENST00000550872 UBE2L6O14933 153 aa10.92□□□□□ -0.66
CHMP1A-209ENST00000550872 NPYP01303 97 aa10.92□□□□□ -0.66
CHMP1A-209ENST00000550872 PHOX2AO14813 284 aa10.91□□□□□ -0.66
CHMP1A-209ENST00000550872 TSHBP01222 138 aa10.91□□□□□ -0.66
CHMP1A-209ENST00000550872 RBX1P62877 108 aa10.91□□□□□ -0.66
CHMP1A-209ENST00000550872 LAGE3Q14657 143 aa10.91□□□□□ -0.66
CHMP1A-209ENST00000550872 Q8N976 141 aa10.91□□□□□ -0.66
CHMP1A-209ENST00000550872 TRAV8-3A0A0A6YYJ7 113 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 ANGP03950 147 aaKnown RBP10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 FCER1GP30273 86 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 TNP2Q05952 138 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 COX19Q49B96 90 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 Q6ZRN7 208 aaPredicted RBP10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 UBE2WQ96B02 151 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 KIR2DL4Q99706 377 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 GNB1LQ9BYB4 327 aa10.9□□□□□ -0.66
CHMP1A-209ENST00000550872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.89□□□□□ -0.67
CHMP1A-209ENST00000550872 TGIF2-C20orf24A0A0A6YYL0 155 aa10.89□□□□□ -0.67
CHMP1A-209ENST00000550872 IGKV2-29A2NJV5 120 aaPredicted RBP10.89□□□□□ -0.67
CHMP1A-209ENST00000550872 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
CHMP1A-209ENST00000550872 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
CHMP1A-209ENST00000550872 KRTAP17-1Q9BYP8 105 aa10.89□□□□□ -0.67
CHMP1A-209ENST00000550872 H7C423 109 aa10.88□□□□□ -0.67
CHMP1A-209ENST00000550872 AMMECR1LQ6DCA0 310 aa10.88□□□□□ -0.67
CHMP1A-209ENST00000550872 LAMTOR2Q9Y2Q5 125 aa10.88□□□□□ -0.67
CHMP1A-209ENST00000550872 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
CHMP1A-209ENST00000550872 A0A1B0GUV1 79 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 PSCAO43653 123 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 CRPP02741 224 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 ESDP10768 282 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 Q0VG73 95 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 TM2D2Q9BX73 214 aa10.87□□□□□ -0.67
CHMP1A-209ENST00000550872 IGLV4-60A0A075B6I1 120 aa10.86□□□□□ -0.67
CHMP1A-209ENST00000550872 MT-ND6P03923 174 aa10.86□□□□□ -0.67
CHMP1A-209ENST00000550872 RNASEKQ6P5S7 137 aaKnown RBP10.86□□□□□ -0.67
CHMP1A-209ENST00000550872 RMI2Q96E14 147 aa10.86□□□□□ -0.67
CHMP1A-209ENST00000550872 MAP1LC3AQ9H492 121 aa10.86□□□□□ -0.67
CHMP1A-209ENST00000550872 LOC389332A0A1B0GUA5 103 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 TCAPO15273 167 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 FGF6P10767 208 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 LINC00269Q8N2A0 174 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 C20orf203Q8NBC4 194 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
CHMP1A-209ENST00000550872 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
CHMP1A-209ENST00000550872 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
CHMP1A-209ENST00000550872 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
CHMP1A-209ENST00000550872 CLPSL2Q6UWE3 100 aa10.84□□□□□ -0.67
CHMP1A-209ENST00000550872 MRPL18Q9H0U6 180 aaKnown RBP10.84□□□□□ -0.67
CHMP1A-209ENST00000550872 SMCO4Q9NRQ5 59 aa10.84□□□□□ -0.67
CHMP1A-209ENST00000550872 A0A1B0GVY2 172 aa10.83□□□□□ -0.68
CHMP1A-209ENST00000550872 RAB5AP20339 215 aa10.83□□□□□ -0.68
CHMP1A-209ENST00000550872 TMEM101Q96IK0 257 aa10.83□□□□□ -0.68
CHMP1A-209ENST00000550872 PRR34Q9NV39 138 aa10.83□□□□□ -0.68
CHMP1A-209ENST00000550872 COX11Q9Y6N1 276 aa10.83□□□□□ -0.68
CHMP1A-209ENST00000550872 ZNF25P17030 456 aaPredicted RBP10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 REG3AQ06141 175 aa10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 MIAQ16674 131 aa10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 CBLN2Q8IUK8 224 aa10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 Q8N8P6 123 aa10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 TMEM18Q96B42 140 aa10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 TRAPPC1Q9Y5R8 145 aa10.82□□□□□ -0.68
CHMP1A-209ENST00000550872 EREGO14944 169 aa10.81□□□□□ -0.68
CHMP1A-209ENST00000550872 DGAT2L7PQ6IED9 249 aa10.81□□□□□ -0.68
CHMP1A-209ENST00000550872 OR5A1Q8NGJ0 315 aa10.81□□□□□ -0.68
CHMP1A-209ENST00000550872 YPEL4Q96NS1 127 aa10.81□□□□□ -0.68
CHMP1A-209ENST00000550872 C1orf43Q9BWL3 253 aa10.81□□□□□ -0.68
CHMP1A-209ENST00000550872 HERC2O95714 4834 aa10.8□□□□□ -0.68
CHMP1A-209ENST00000550872 A0A087WTM6 91 aa10.8□□□□□ -0.68
CHMP1A-209ENST00000550872 SMAGPQ0VAQ4 97 aa10.8□□□□□ -0.68
CHMP1A-209ENST00000550872 MRPL52Q86TS9 123 aaKnown RBP10.8□□□□□ -0.68
CHMP1A-209ENST00000550872 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
CHMP1A-209ENST00000550872 NXT2Q9NPJ8 142 aaKnown RBP10.8□□□□□ -0.68
CHMP1A-209ENST00000550872 IGKV3OR2-268A0A0C4DH90 116 aa10.79□□□□□ -0.68
CHMP1A-209ENST00000550872 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
CHMP1A-209ENST00000550872 IFI27P40305 119 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms