RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 C7orf77A4D0Y5 90 aa12.98□□□□□ -0.33
DDX54-207ENST00000550016 CKS2P33552 79 aa12.98□□□□□ -0.33
DDX54-207ENST00000550016 POLR2KP53803 58 aaKnown RBP12.98□□□□□ -0.33
DDX54-207ENST00000550016 CLRN3Q8NCR9 226 aa12.98□□□□□ -0.33
DDX54-207ENST00000550016 TMEM242Q9NWH2 141 aa12.98□□□□□ -0.33
DDX54-207ENST00000550016 RHEBQ15382 184 aa12.97□□□□□ -0.33
DDX54-207ENST00000550016 DNAH17Q9UFH2 4485 aa12.97□□□□□ -0.33
DDX54-207ENST00000550016 DNAH2Q9P225 4427 aa12.96□□□□□ -0.33
DDX54-207ENST00000550016 TRBV27A0A0K0K1C4 114 aa12.96□□□□□ -0.33
DDX54-207ENST00000550016 PPBPP02775 128 aa12.96□□□□□ -0.33
DDX54-207ENST00000550016 RBX1P62877 108 aa12.96□□□□□ -0.33
DDX54-207ENST00000550016 Q8N976 141 aa12.96□□□□□ -0.33
DDX54-207ENST00000550016 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
DDX54-207ENST00000550016 TRBV24-1A0A075B6N3 115 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 TRAV9-1A0A075B6T8 112 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 VCYO14598 125 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 UBE2L6O14933 153 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 PSCAO43653 123 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 APCSP02743 223 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 ANGP03950 147 aaKnown RBP12.95□□□□□ -0.34
DDX54-207ENST00000550016 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
DDX54-207ENST00000550016 RPS10P5Q9NQ39 176 aa12.95□□□□□ -0.34
DDX54-207ENST00000550016 A0A1B0GUV1 79 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 D6R8Y8 96 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 TSHBP01222 138 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 APOC3P02656 99 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 S100PP25815 95 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 Q0VG73 95 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 NDUFA5Q16718 116 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 UBE2WQ96B02 151 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
DDX54-207ENST00000550016 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
DDX54-207ENST00000550016 RMI2Q96E14 147 aa12.93□□□□□ -0.34
DDX54-207ENST00000550016 H7C423 109 aa12.92□□□□□ -0.34
DDX54-207ENST00000550016 EREGO14944 169 aa12.92□□□□□ -0.34
DDX54-207ENST00000550016 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
DDX54-207ENST00000550016 TMEM136Q6ZRR5 245 aa12.92□□□□□ -0.34
DDX54-207ENST00000550016 ORMDL3Q8N138 153 aa12.92□□□□□ -0.34
DDX54-207ENST00000550016 COX11Q9Y6N1 276 aa12.92□□□□□ -0.34
DDX54-207ENST00000550016 PHOX2AO14813 284 aa12.91□□□□□ -0.34
DDX54-207ENST00000550016 CRPP02741 224 aa12.91□□□□□ -0.34
DDX54-207ENST00000550016 ESDP10768 282 aa12.91□□□□□ -0.34
DDX54-207ENST00000550016 RPL32P62910 135 aaKnown RBP12.91□□□□□ -0.34
DDX54-207ENST00000550016 SVBPQ8N300 66 aa12.91□□□□□ -0.34
DDX54-207ENST00000550016 A0A087WTM6 91 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 SNAPINO95295 136 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 NPYP01303 97 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 LINC00269Q8N2A0 174 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 PRELID3AQ96N28 172 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 KIR2DL4Q99706 377 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 PRR34Q9NV39 138 aa12.9□□□□□ -0.34
DDX54-207ENST00000550016 IGLV4-60A0A075B6I1 120 aa12.89□□□□□ -0.35
DDX54-207ENST00000550016 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
DDX54-207ENST00000550016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.89□□□□□ -0.35
DDX54-207ENST00000550016 IGKV2-29A2NJV5 120 aaPredicted RBP12.89□□□□□ -0.35
DDX54-207ENST00000550016 FCER1GP30273 86 aa12.89□□□□□ -0.35
DDX54-207ENST00000550016 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
DDX54-207ENST00000550016 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
DDX54-207ENST00000550016 HECTD4Q9Y4D8 3996 aa12.88□□□□□ -0.35
DDX54-207ENST00000550016 MIAQ16674 131 aa12.88□□□□□ -0.35
DDX54-207ENST00000550016 SPATA12Q7Z6I5 190 aa12.88□□□□□ -0.35
DDX54-207ENST00000550016 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
DDX54-207ENST00000550016 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
DDX54-207ENST00000550016 LRCOL1A6NCL2 159 aa12.87□□□□□ -0.35
DDX54-207ENST00000550016 FGF6P10767 208 aa12.87□□□□□ -0.35
DDX54-207ENST00000550016 SLC7A5P1Q8MH63 180 aa12.87□□□□□ -0.35
DDX54-207ENST00000550016 C1orf43Q9BWL3 253 aa12.87□□□□□ -0.35
DDX54-207ENST00000550016 LAMTOR2Q9Y2Q5 125 aa12.87□□□□□ -0.35
DDX54-207ENST00000550016 TCAPO15273 167 aa12.86□□□□□ -0.35
DDX54-207ENST00000550016 REG3AQ06141 175 aa12.86□□□□□ -0.35
DDX54-207ENST00000550016 RNASEKQ6P5S7 137 aaKnown RBP12.86□□□□□ -0.35
DDX54-207ENST00000550016 CLPSL2Q6UWE3 100 aa12.86□□□□□ -0.35
DDX54-207ENST00000550016 PKD1P98161 4303 aa12.86□□□□□ -0.35
DDX54-207ENST00000550016 ZNF25P17030 456 aaPredicted RBP12.85□□□□□ -0.35
DDX54-207ENST00000550016 COX19Q49B96 90 aa12.85□□□□□ -0.35
DDX54-207ENST00000550016 MAPKAPK5-AS1Q8N8E1 139 aa12.85□□□□□ -0.35
DDX54-207ENST00000550016 GNB1LQ9BYB4 327 aa12.85□□□□□ -0.35
DDX54-207ENST00000550016 PRSS47A8MTI9 375 aa12.84□□□□□ -0.35
DDX54-207ENST00000550016 HLA-DQA1P01909 254 aa12.84□□□□□ -0.35
DDX54-207ENST00000550016 KRTAP10-2P60368 255 aa12.84□□□□□ -0.35
DDX54-207ENST00000550016 TMEM101Q96IK0 257 aa12.84□□□□□ -0.35
DDX54-207ENST00000550016 MRPL52Q86TS9 123 aaKnown RBP12.83□□□□□ -0.36
DDX54-207ENST00000550016 MAP1LC3AQ9H492 121 aa12.83□□□□□ -0.36
DDX54-207ENST00000550016 PGPEP1Q9NXJ5 209 aa12.83□□□□□ -0.36
DDX54-207ENST00000550016 TRAV8-4A0A0B4J246 113 aa12.82□□□□□ -0.36
DDX54-207ENST00000550016 BAALCQ8WXS3 180 aa12.82□□□□□ -0.36
DDX54-207ENST00000550016 C16orf90A8MZG2 172 aa12.81□□□□□ -0.36
DDX54-207ENST00000550016 SMAGPQ0VAQ4 97 aa12.81□□□□□ -0.36
DDX54-207ENST00000550016 KIAA1644Q3SXP7 199 aa12.81□□□□□ -0.36
DDX54-207ENST00000550016 OR5A1Q8NGJ0 315 aa12.81□□□□□ -0.36
DDX54-207ENST00000550016 TMEM18Q96B42 140 aa12.81□□□□□ -0.36
DDX54-207ENST00000550016 LOC389332A0A1B0GUA5 103 aa12.8□□□□□ -0.36
DDX54-207ENST00000550016 MT-ND6P03923 174 aa12.8□□□□□ -0.36
DDX54-207ENST00000550016 RAB5AP20339 215 aa12.8□□□□□ -0.36
DDX54-207ENST00000550016 WFDC2Q14508 124 aa12.8□□□□□ -0.36
DDX54-207ENST00000550016 Q8N814 137 aa12.8□□□□□ -0.36
DDX54-207ENST00000550016 IGLV10-54A0A075B6I4 117 aa12.79□□□□□ -0.36
DDX54-207ENST00000550016 TGIF2-C20orf24A0A0A6YYL0 155 aa12.79□□□□□ -0.36
DDX54-207ENST00000550016 LECT2O14960 151 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms