RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 OCC1Q8TAD7 63 aa8.66□□□□□ -1.02
GCN1-206ENST00000549815 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
GCN1-206ENST00000549815 J3QL48 77 aa8.65□□□□□ -1.02
GCN1-206ENST00000549815 Q6ZNX1 250 aa8.65□□□□□ -1.02
GCN1-206ENST00000549815 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
GCN1-206ENST00000549815 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
GCN1-206ENST00000549815 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
GCN1-206ENST00000549815 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
GCN1-206ENST00000549815 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
GCN1-206ENST00000549815 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
GCN1-206ENST00000549815 PANO1I0J062 215 aa8.63□□□□□ -1.03
GCN1-206ENST00000549815 TWIST1Q15672 202 aa8.63□□□□□ -1.03
GCN1-206ENST00000549815 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
GCN1-206ENST00000549815 CLRN3Q8NCR9 226 aa8.63□□□□□ -1.03
GCN1-206ENST00000549815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
GCN1-206ENST00000549815 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
GCN1-206ENST00000549815 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
GCN1-206ENST00000549815 LYPD6BQ8NI32 183 aa8.62□□□□□ -1.03
GCN1-206ENST00000549815 TMEM250H0YL14 139 aa8.61□□□□□ -1.03
GCN1-206ENST00000549815 SLPIP03973 132 aa8.61□□□□□ -1.03
GCN1-206ENST00000549815 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
GCN1-206ENST00000549815 COTL1Q14019 142 aa8.61□□□□□ -1.03
GCN1-206ENST00000549815 FAM231DQ6ZW35 169 aa8.61□□□□□ -1.03
GCN1-206ENST00000549815 AMTP48728 403 aa8.6□□□□□ -1.03
GCN1-206ENST00000549815 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
GCN1-206ENST00000549815 ALKAL2Q6UX46 152 aa8.6□□□□□ -1.03
GCN1-206ENST00000549815 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
GCN1-206ENST00000549815 UBE2L6O14933 153 aa8.59□□□□□ -1.03
GCN1-206ENST00000549815 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
GCN1-206ENST00000549815 BLOC1S1P78537 153 aa8.59□□□□□ -1.03
GCN1-206ENST00000549815 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
GCN1-206ENST00000549815 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
GCN1-206ENST00000549815 GATCO43716 136 aaKnown RBP8.58□□□□□ -1.04
GCN1-206ENST00000549815 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
GCN1-206ENST00000549815 NCR2O95944 276 aa8.57□□□□□ -1.04
GCN1-206ENST00000549815 OXTP01178 125 aa8.57□□□□□ -1.04
GCN1-206ENST00000549815 CT83Q5H943 113 aa8.57□□□□□ -1.04
GCN1-206ENST00000549815 C15orf56Q8N910 161 aa8.57□□□□□ -1.04
GCN1-206ENST00000549815 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 A8MWL6 223 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 H7C423 109 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 NDUFS6O75380 124 aaKnown RBP8.56□□□□□ -1.04
GCN1-206ENST00000549815 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 TNXBP22105 4242 aa8.56□□□□□ -1.04
GCN1-206ENST00000549815 IGHV3-64A0A075B6Q5 118 aa8.55□□□□□ -1.04
GCN1-206ENST00000549815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
GCN1-206ENST00000549815 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
GCN1-206ENST00000549815 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
GCN1-206ENST00000549815 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
GCN1-206ENST00000549815 APCSP02743 223 aa8.55□□□□□ -1.04
GCN1-206ENST00000549815 SMIM15Q7Z3B0 74 aa8.55□□□□□ -1.04
GCN1-206ENST00000549815 AP5S1Q9NUS5 200 aa8.55□□□□□ -1.04
GCN1-206ENST00000549815 hCG_2014768A0A024R1R8 64 aa8.54□□□□□ -1.04
GCN1-206ENST00000549815 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
GCN1-206ENST00000549815 FGF6P10767 208 aa8.54□□□□□ -1.04
GCN1-206ENST00000549815 LINC01551Q86U37 167 aa8.54□□□□□ -1.04
GCN1-206ENST00000549815 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
GCN1-206ENST00000549815 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 I3L3M4 83 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 ESDP10768 282 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 CEBPGP53567 150 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
GCN1-206ENST00000549815 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 FAM210AQ96ND0 272 aa8.53□□□□□ -1.04
GCN1-206ENST00000549815 A0A087WYN8 130 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 HIGD1CA8MV81 97 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 TSHBP01222 138 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
GCN1-206ENST00000549815 FOXI1Q12951 378 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
GCN1-206ENST00000549815 CFAP161Q6P656 301 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 TSKUQ8WUA8 353 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 SMIM7Q9BQ49 75 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 TMEM191AQ9H0A3 160 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 OSTCQ9NRP0 149 aa8.52□□□□□ -1.05
GCN1-206ENST00000549815 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
GCN1-206ENST00000549815 A0A1B0GUT8 65 aa8.51□□□□□ -1.05
GCN1-206ENST00000549815 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
GCN1-206ENST00000549815 RAB4AP20338 218 aa8.51□□□□□ -1.05
GCN1-206ENST00000549815 PMCHP20382 165 aa8.51□□□□□ -1.05
GCN1-206ENST00000549815 RPS10P46783 165 aaKnown RBP8.51□□□□□ -1.05
GCN1-206ENST00000549815 POLR2KP53803 58 aaKnown RBP8.51□□□□□ -1.05
GCN1-206ENST00000549815 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
GCN1-206ENST00000549815 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
GCN1-206ENST00000549815 EIF5A2Q9GZV4 153 aaKnown RBP8.51□□□□□ -1.05
GCN1-206ENST00000549815 ZNF727A8MUV8 499 aa8.5□□□□□ -1.05
GCN1-206ENST00000549815 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
GCN1-206ENST00000549815 ST20Q9HBF5 79 aa8.5□□□□□ -1.05
GCN1-206ENST00000549815 TMEM242Q9NWH2 141 aa8.5□□□□□ -1.05
GCN1-206ENST00000549815 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
GCN1-206ENST00000549815 V9GYV3 84 aa8.5□□□□□ -1.05
GCN1-206ENST00000549815 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
GCN1-206ENST00000549815 COX6A2Q02221 97 aa8.49□□□□□ -1.05
GCN1-206ENST00000549815 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
GCN1-206ENST00000549815 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms